DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Arp3 and actb

Sequence 1:NP_001261559.1 Gene:Arp3 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_998884.1 Gene:actb XenbaseID:XB-GENE-490883 Length:375 Species:Xenopus tropicalis

Alignment Length:421 Identity:153/422 (36%)
Similarity:217/422 (51%) Gaps:61/422 (14%)


  Fly     5 LPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDA 69
            :.|.|:|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||...
 Frog     5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSK 61

  Fly    70 TG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFET 133
            .| .::|||:.||:|.:||.||:......:..||..||:|..||||.|||...|||...:|||||
 Frog    62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

  Fly   134 FNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198
            ||.|.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||
 Frog   127 FNTPAMYVAIQAVLSLYAS-------GRT-TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183

  Fly   199 NITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWI 253
            ::|.::..:|.||..........|..:.||||.||:..|..:|.|          .|:...|:.|
 Frog   184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248

  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNN 318
                            .:|.|||..||..|.|.|...: :..:.|...|.|..|.:|:|:.||.|
 Frog   249 ----------------TIGNERFRCPEALFQPSFLGME-SCGIHETTYNSIMKCDVDIRKDLYAN 296

  Fly   319 IVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSM 383
            .|||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:
 Frog   297 TVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSI 345

  Fly   384 LASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            |||...|.|:..:|..|:|.||||. |...|
 Frog   346 LASLSTFQQMWISKQEYDESGPSIV-HRKCF 375

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 153/422 (36%)
COG5277 6..410 CDD:227602 151/415 (36%)
actbNP_998884.1 PTZ00281 1..375 CDD:173506 152/420 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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