DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actb

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_031419.1 Gene:Actb / 11461 MGIID:87904 Length:375 Species:Mus musculus


Alignment Length:421 Identity:153/421 - (36%)
Similarity:217/421 - (51%) Gaps:61/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDA 69
            :.|.|:|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||...
Mouse     5 IAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSK 61

  Fly    70 TG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFET 133
            .| .::|||:.||:|.:||.||:......:..||..||:|..||||.|||...|||...:|||||
Mouse    62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126

  Fly   134 FNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198
            ||.|.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||
Mouse   127 FNTPAMYVAIQAVLSLYAS-------GRT-TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183

  Fly   199 NITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWI 253
            ::|.::..:|.||..........|..:.||||.||:..|..:|.|          .|:...|:.|
Mouse   184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 248

  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNN 318
                            .:|.|||..||..|.|.|...: :..:.|...|.|..|.:|:|:.||.|
Mouse   249 ----------------TIGNERFRCPEALFQPSFLGME-SCGIHETTFNSIMKCDVDIRKDLYAN 296

  Fly   319 IVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSM 383
            .|||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:
Mouse   297 TVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSI 345

  Fly   384 LASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            |||...|.|:..:|..|:|.||||. |...|
Mouse   346 LASLSTFQQMWISKQEYDESGPSIV-HRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 151/413 (37%)
ActbNP_031419.1 ASKHA_NBD_actin 6..370 CDD:466823 150/412 (36%)

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