DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sarm and Sarm1

DIOPT Version :10

Sequence 1:NP_001246662.1 Gene:Sarm / 38895 FlyBaseID:FBgn0262579 Length:1730 Species:Drosophila melanogaster
Sequence 2:NP_001099287.1 Gene:Sarm1 / 287545 RGDID:1310078 Length:724 Species:Rattus norvegicus


Alignment Length:682 Identity:300/682 - (43%)
Similarity:428/682 - (62%) Gaps:18/682 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   671 GSGQQEIEQTINKYSNMLTSIVSSLQEDERGGSAITVHDVGGKKSQYLEKINEVIRRAWAVPTHG 735
            |.|.:|:...:.  :.:..::..||.|.::..|.:............|.::.:::..||.:|..|
  Rat    47 GRGSREVSPGVG--TEVQGALERSLPELQQALSELKQASAAQAVGAGLAEVFQLVEEAWLLPAVG 109

  Fly   736 HELGYSLCNSLRQSGGLDLLMKNCVKPDLQ--FSSAQLLEQCLTTENRKHVVDNGLDKVVNVACV 798
            .|:...||:::|..||||||::....|:|:  ..:|:||||.|..|||..|...||..::|::  
  Rat   110 REVAQGLCDAIRLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLS-- 172

  Fly   799 CTKNSNMEHSRVGTGILEHLFKHSEGTCSDVIRLGGLDAVLFECRTSDLETLRHCASALANLSLY 863
             .:...:|.:|...|||||:|||||.||..::..|||||||:.||.:|...|||||.||||.:|:
  Rat   173 -KEREPVELARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALANCALH 236

  Fly   864 GGAENQEEMILRKVPMWLFPLAFHNDDN-IKYYACLAIAVLVANKEIEAEVLKSGCLDLVEPFVT 927
            ||...|..|:.::...|||||||..:|. ::.:||||:|||..|||:|.||..||.|.||||.|.
  Rat   237 GGQTVQRCMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVEHSGTLALVEPLVA 301

  Fly   928 SHDPSAFAR-----SNLAHAHGQSKHWLKRLVPVLSSNREEARNLAAFHFCMEAGIKREQGNTDI 987
            |.||..|||     |:.:...|...  |:.||.:|.|:|.||:.:.||:.|.||.||..||.|.:
  Rat   302 SLDPGRFARCLVDASDTSQGRGPDD--LQSLVLLLDSSRLEAQCIGAFYLCAEAAIKSLQGKTKV 364

  Fly   988 FREINAIEALKNVAS-CPNAIASKFAAQALRLIGETVPHKLSQQVPLWSVEDVQEWVKQIGFNDY 1051
            |.:|.||::||.:.| ..|...|..|.:||||:||.||.::...|..|...:||.|::||||:.|
  Rat   365 FSDIGAIQSLKRLVSYSTNGTTSTLAKRALRLLGEEVPRRILPCVASWKEAEVQTWLQQIGFSQY 429

  Fly  1052 IDKFNESQVDGDLLLKLNQDNLRADIGIGNGILLKRFERELQNLKRMADYSSKDTAKMHQFLSEI 1116
            .:.|.:.||||||||:|..:.|:.|:|:.:.|..|||.|||..||..|.|::.|.:.:..:|..:
  Rat   430 CENFRDQQVDGDLLLRLTDEELQTDLGMKSSITRKRFFRELTELKTFASYATCDRSNLADWLGSL 494

  Fly  1117 GTDYCTYTYAMLNAGIDKCALPHVNEDMLMTECGIHNSIHRLRILNAVKN-LENSLPSSSEENMA 1180
            ...:..|||.:::.|:|:..|..|:|..|:.:|||...:||.|||:|.:. |.:.||.:..:...
  Rat   495 DPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIRLGVHRTRILSAAREMLHSPLPCTGGKPSG 559

  Fly  1181 KTLDVFVSYRRSNGSQLASLLKVHLQLRGFSVFIDVERLEAGKFDNGLLNSIRQAKNFVLVLTPD 1245
            .|.|||:||||::||||||||||||||.|||||||||:||||||::.|:.|:..|:||||||:..
  Rat   560 DTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQSVMAARNFVLVLSAG 624

  Fly  1246 ALHRCINDEDCKDWVHREIVAALNSNCNIIPIIDQQFDWPEVERLPEDMRSVAHFNGVNWIHDYQ 1310
            ||.:|:.|.:||||||:|||.||:.:.||:|||| .|:|||.:.|||||::|..|||:.|.|:||
  Rat   625 ALDKCMQDHECKDWVHKEIVTALSCSKNIVPIID-GFEWPEPQALPEDMQAVLTFNGIKWSHEYQ 688

  Fly  1311 DACIDKLERFLRGEKNIDRIAAMVPGTPGSVS 1342
            :|.|:|:.|||:|..:.|..|.......|:.|
  Rat   689 EATIEKIIRFLQGRPSQDSSAGSDTSLEGATS 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SarmNP_001246662.1 SARM1_N 716..1021 CDD:467946 137/313 (44%)
SAM_SARM1-like_repeat1 1031..1099 CDD:188900 32/67 (48%)
SAM_SARM1-like_repeat2 1100..1169 CDD:188901 22/69 (32%)
TIR 1184..1321 CDD:214587 87/136 (64%)
Sarm1NP_001099287.1 SAM_SARM1-like_repeat2 479..547 CDD:188901 21/67 (31%)
TIR 561..702 CDD:214587 90/141 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 703..724 4/18 (22%)
ARM 1. /evidence=ECO:0000255 60..100 5/39 (13%)
SARM1_N 88..399 CDD:467946 137/315 (43%)
ARM 2. /evidence=ECO:0000255 114..153 16/38 (42%)
ARM 3. /evidence=ECO:0000255 155..193 14/40 (35%)
ARM 4. /evidence=ECO:0000255 196..235 22/38 (58%)
ARM 5. /evidence=ECO:0000255 237..280 19/42 (45%)
ARM 6. /evidence=ECO:0000255 281..314 19/32 (59%)
ARM 7. /evidence=ECO:0000255 315..354 14/40 (35%)
ARM 8. /evidence=ECO:0000255 359..402 19/42 (45%)
SAM_SARM1-like_repeat1 409..477 CDD:188900 32/67 (48%)

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