DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mitf and MITF

DIOPT Version :10

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001341533.1 Gene:MITF / 4286 HGNCID:7105 Length:526 Species:Homo sapiens


Alignment Length:621 Identity:181/621 - (29%)
Similarity:254/621 - (40%) Gaps:219/621 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 PLSGGPTFKTATPTSRTQLKLQLQRE--QQQQMMIQQQTLDTAMDPKMHLLFGSGQGLMESEFID 226
            |.:..|...:::.|||..|:.||.||  |:|:...|||.|                         
Human    41 PGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKL------------------------- 80

  Fly   227 SGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGAKLKVP--LQSIGVDVPPQVLQVSTVLENPTRY 289
                           |.:|.:|....:..:....:.||  |.| ...||.:||:|.|.|||||:|
Human    81 ---------------QAAQFMQQRVPVSQTPAINVSVPTTLPS-ATQVPMEVLKVQTHLENPTKY 129

  Fly   290 HVIQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDS 354
            |:.|.|:.||:||||.:              |||..|:    |..||.              |.:
Human   130 HIQQAQRQQVKQYLSTT--------------LANKHAN----QVLSLP--------------CPN 162

  Fly   355 AVSAKRIMPSDDAMPISPFGGSFVRCDDINPIEP-TVLRPNSHGAGEPENAHRTAQLGLSKANSS 418
                   .|.|..||  |..||..      |..| .:|..||:  .|.|..::..:...:::...
Human   163 -------QPGDHVMP--PVPGSSA------PNSPMAMLTLNSN--CEKEGFYKFEEQNRAESECP 210

  Fly   419 LSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQNDSFNFDKNFNS 483
            ..:|.|.:                               |..:.||:.|||:     :.:.::|.
Human   211 GMNTHSRA-------------------------------SCMQMDDVIDDII-----SLESSYNE 239

  Fly   484 E----------------------------------LSIKQE-PQNL-------------TDAEMN 500
            |                                  |:|... |.||             |::|..
Human   240 EILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTACIFPTESEAR 304

  Fly   501 ALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYIKC 565
            ||||:||||||||:|||||||||||||||||||:||.:|.      |:|.|||||||:|||||:.
Human   305 ALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDP------DMRWNKGTILKASVDYIRK 363

  Fly   566 LKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLSENHLTSLSAP--------TQP 622
            |:.|..|.::.|.||:::|..||.|:.||:||||||::||:.|..:  |.|.:|        .:|
Human   364 LQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPS--TGLCSPDLVNRIIKQEP 426

  Fly   623 YLKSFS---------LSPTASRSRRSLFDQPVEKKIQVIDGADGN--------MGMNQVDEFMED 670
            .|::.|         |:.|.:   ..|.|..:.....:..|.:.|        ||....|..|:|
Human   427 VLENCSQDLLQHHADLTCTTT---LDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDD 488

  Fly   671 CKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFE 706
            ....|...||:|||    .|...|.:|...:|.|.|
Human   489 TLSPVGVTDPLLSS----VSPGASKTSSRRSSMSME 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:464952 21/38 (55%)
bHLHzip_MITF_like 504..577 CDD:381403 48/72 (67%)
MITFNP_001341533.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 2/12 (17%)
MITF_TFEB_C_3_N 56..194 CDD:464952 61/227 (27%)
Transactivation 224..295 12/75 (16%)
bHLHzip_MITF 300..403 CDD:381496 67/108 (62%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:24631970 374..395 9/20 (45%)
DUF3371 397..516 CDD:463372 32/127 (25%)
DNA-binding regulation 401..431 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526 11/29 (38%)

Return to query results.
Submit another query.