DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mitf and Tfe3

DIOPT Version :10

Sequence 1:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_766060.2 Gene:Tfe3 / 209446 MGIID:98511 Length:572 Species:Mus musculus


Alignment Length:733 Identity:198/733 - (27%)
Similarity:281/733 - (38%) Gaps:251/733 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LCMTNIRVSVGIDKDLEMILEMDP-SIVDLGD----------ISIDET-AEPRIVGLPPLSGGP- 169
            |.:.::....||..|:|:...:|| |..:|..          ||:..| ..|..:.....:||. 
Mouse    38 LSLNSLLPESGIVADIELENILDPDSFYELKSQPLSLRSSLPISLQATPTTPATLSASSSAGGSR 102

  Fly   170 TFKTATPTSRTQLKLQLQREQQQQMMIQQQTLDTAMDPKMHLLFGSGQGLMESEFIDSGSTSACG 234
            |...::.:||..|:.||.|.|.|:...:::....|..|            ..|....|.:.|..|
Mouse   103 TPAMSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAP------------FPSPAPASPAISVIG 155

  Fly   235 SGSSSLEQMSQLVQMDNLIDSSSGAKLKVPLQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQV 299
            .                   |:.|..|..|..:   .||.:||:|.|.||||||||:.|.::.||
Mouse   156 V-------------------SAGGHTLSRPPPA---QVPREVLKVQTHLENPTRYHLQQARRQQV 198

  Fly   300 RQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKRIMPS 364
            :||||.:..|          |||:.:                                       
Mouse   199 KQYLSTTLGP----------KLASQA--------------------------------------- 214

  Fly   365 DDAMPISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSKANSSL-------SST 422
                 ::|            |..|:..:|    ...||.||.|...| |..||.:       ||.
Mouse   215 -----LTP------------PPGPSSAQP----LPAPETAHATGPTG-SAPNSPMALLTIGSSSE 257

  Fly   423 RSSSGIVNSIRISSTSS----------------SLQSTSAPISPSVSSVATS--VSEPDDIFDDI 469
            :....:::.| ||..||                .|.|| .|:|.::..|.:|  |:.|       
Mouse   258 KEIDDVIDEI-ISLESSYNDEMLSYLPGGTAGLQLPST-LPVSGNLLDVYSSQGVATP------- 313

  Fly   470 LQNDSFNFDKNFNSEL-SIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTL 533
                :.....:..:|| :||:|   :::.|..||.|:||||||||:|||||||||||||||||||
Mouse   314 ----AITVSNSCPAELPNIKRE---ISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTL 371

  Fly   534 LPKGSDAFYEVVRDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELE 598
            :||.:|.      ::|.|||||||:|||||:.|:.|..|.:..|.|||.:|..||.|..||:|||
Mouse   372 IPKSNDP------EMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELE 430

  Fly   599 MQAKSHGILLSENHLTSLSAPTQPYLKSFSLSPTASRSRRSLFDQPVEKKIQVIDGADGNMGMNQ 663
            :||:.||          |..|..|.|    ||.|.|....||  :|.:..|:             
Mouse   431 LQAQIHG----------LPVPPNPGL----LSLTTSSVSDSL--KPEQLDIE------------- 466

  Fly   664 VDEFMEDCKYAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFEPKNFSEADESLFRGKSSLASDD 728
             :|......:.|.||.   :.::..|..|..||...|:                           
Mouse   467 -EEGRPSTTFHVSGGP---AQNAPPQQPPAPPSDALLD--------------------------- 500

  Fly   729 CCGINCSTSCYIQHQLTSREGHPNHSHHTGIREI----HSLSDSAQNSEFSRLEHCDDPLLS--- 786
                        .|..:...|......|.|:.:|    ..:.........|.|....|||||   
Mouse   501 ------------LHFPSDHLGDLGDPFHLGLEDILMEEEGMVGGLSGGALSPLRAASDPLLSSVS 553

  Fly   787 ------SSHRSLGTVDED 798
                  ||.||..:::|:
Mouse   554 PAVSKASSRRSSFSMEEE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:464952 22/38 (58%)
bHLHzip_MITF_like 504..577 CDD:381403 47/72 (65%)
Tfe3NP_766060.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..152 16/76 (21%)
MITF_TFEB_C_3_N 112..265 CDD:464952 57/257 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..248 15/98 (15%)
Strong transcription activation domain. /evidence=ECO:0000255 259..270 2/11 (18%)
bHLHzip_TFE3 336..426 CDD:381498 58/95 (61%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P19532 355..358 2/2 (100%)
Leucine-zipper 408..429 10/20 (50%)
DUF3371 431..570 CDD:463372 41/210 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..495 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 530..572 12/42 (29%)

Return to query results.
Submit another query.