DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34039 and Commd4

DIOPT Version :10

Sequence 1:NP_001034012.2 Gene:CG34039 / 3885643 FlyBaseID:FBgn0054039 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_079693.1 Gene:Commd4 / 66199 MGIID:1913449 Length:199 Species:Mus musculus


Alignment Length:208 Identity:68/208 - (32%)
Similarity:108/208 - (51%) Gaps:32/208 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFRFCGEGDCPDWVLAEIISTLSNLSIENLEQLSDLVAQRICGETFEEAKIKSLTSTLTNEG-- 63
            |:|||||:.||||||||| ||||:.:|...|..|...|.:.:.|:..:..||..||:....|.  
Mouse     1 MRFRFCGDLDCPDWVLAE-ISTLAKISSVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGD 64

  Fly    64 -KTAVACINFMLTSAARYSCSESIFGEEIQQLGLPKDHAAAMCRVLQKHSATIRQTLINKSFRIN 127
             |..||.::|:|:|||::|........|:|||||||:||.::||..::..:.:::.|...|.|:|
Mouse    65 VKATVAVLSFILSSAAKHSVDSDSLSSELQQLGLPKEHATSLCRCYEEKQSPLQEHLRACSLRVN 129

  Fly   128 ELTSVRDISTPGQTPPNYATLELKISQELVDGLPKDTTHV----------------LNIDRTQMK 176
            .|.||.            ..::..:|..|:..:.:...|:                :::...:.:
Mouse   130 RLASVG------------WRVDYTLSSSLLHSVEEPMVHLQLQVVPAPGTQAQPVSMSLSADKFQ 182

  Fly   177 ALLAELKLARDVM 189
            .||||||.|:.:|
Mouse   183 VLLAELKQAQTMM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34039NP_001034012.2 Commd 38..190 CDD:471425 46/171 (27%)
Commd4NP_079693.1 Commd4 25..198 CDD:240100 49/183 (27%)

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