DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34041 and PH4alphaPV

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster


Alignment Length:349 Identity:80/349 - (22%)
Similarity:167/349 - (47%) Gaps:43/349 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 ILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALIDLATY 302
            :|:..::::.|..:..|..|..|.:.::.:|.::..::..||:|...||.||:|:..::..|   
  Fly    13 LLTYQVLLLLLRQAKGEESHCTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSL--- 74

  Fly   303 HIQFERDKLAIA-----SSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASLMSIKKYLPTKND 362
              :.|.||...:     |:|:.|:|||..|..||..|||::.:..|..::..:..:::::||..|
  Fly    75 --RLENDKARSSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQVERIQELREHMPTHTD 137

  Fly   363 ISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCVALSD 427
            :.|....:.::.:.|.:...:|::|.:.|.|  |..|                 :::.|..|:..
  Fly   138 VEEAVTALDRIQSTYGLKVPEISHGFLNGKQ--YNVS-----------------LTVLDTYAMGQ 183

  Fly   428 HSMEMKDYNKSKEWLNVAISMLESSAYWDPI-VPSADLYLKLAEVYVKQQNWTLALETVEFALKS 491
            ...:.|:|..:..|:..::.::|:.:...|: :...::.:..||..:|......||:.|..||..
  Fly   184 ILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMVYAETLLKLNQHADALKVVNIALTD 248

  Fly   492 NPRNAQLIRMQKRLSYHILLGPPKSPKLNIENND----YRLRKNG--------SLYCFYDTKIRT 544
            ||.:.:|:..:..:...|..|...:|.:.::...    |::...|        .|||.|:.....
  Fly   249 NPHDIKLLLKKSEIETMIRTGTNNAPPVKVQATGVPTAYQIGCRGQFPPSADSKLYCLYNRTTSP 313

  Fly   545 FYSLLAPIKAEVLFIDPLVILYHE 568
            |. :|||:|.|::.:||.::|||:
  Fly   314 FL-ILAPLKMELVGLDPYMVLYHD 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 34/135 (25%)
LapB <435..>505 CDD:442196 15/70 (21%)
TPR repeat 452..491 CDD:276809 9/39 (23%)
PH4alphaPVNP_733395.1 P4Ha_N 35..166 CDD:462433 34/135 (25%)
NrfG 179..>256 CDD:443378 16/76 (21%)
TPR repeat 179..213 CDD:276809 5/33 (15%)
TPR repeat 218..248 CDD:276809 8/29 (28%)
P4Hc 339..510 CDD:214780
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.