DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and PH4alphaNE1

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:371 Identity:80/371 - (21%)
Similarity:152/371 - (40%) Gaps:77/371 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 ILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALIDLATY 302
            :|.||||.: |:..:..:.:..|.:.:.::|..::.:.:.|.:.:.|::|.|:.::..|..:...
  Fly     5 VLLVGLIFL-LAQGSLASDYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKE 68

  Fly   303 HIQFERDKLAIASSPVASYSLIHHMQSDWT----HWQLFLQEDPGKDELASLMSIKKY---LPTK 360
            |.....|.....::||..|.|:..:.:||:    ..||..:|       .:..:.::|   .|::
  Fly    69 HTMAASDTENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEE-------MNFNATREYGLSYPSQ 126

  Fly   361 NDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCVAL 425
            .|:......:.::.:.|.:....:|.|::.|  .||.|.                 ||.:||..|
  Fly   127 EDVEGAALALVRLQSTYKLDVAQVAQGILNG--VKYGSD-----------------MSWQDCFEL 172

  Fly   426 SDHSMEMKDYNKSKEWLNVAISMLESSAYWDP--IVPSA---DLYLKLAEVYVKQ----QNWTLA 481
            .....||:|||.:|.||..::..|.......|  :.|::   .:.|...|...|.    .::..|
  Fly   173 GQQLFEMEDYNNTKVWLRESMERLRRQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTA 237

  Fly   482 LETVEFALKSNPRNAQLIRMQKRLSYHILLG-----PPKS------PK------LNIENNDYRLR 529
            .|..:..|:.:|:..:        ::|  ||     ||:.      ||      |:.|...|...
  Fly   238 FELSQRVLQFDPKRIR--------NWH--LGDKGTAPPEDIDDVYLPKHSDSYSLSQEFAKYEKV 292

  Fly   530 KNGSLYCFYDTKIRTFYS-------LLAPIKAEVLFIDPLVILYHE 568
            ..|.::.....::|..||       .|||:|.|...:||.|..:|:
  Fly   293 CRGEVHPIVRQELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHD 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 24/137 (18%)
LapB <435..>505 CDD:442196 15/78 (19%)
TPR repeat 452..491 CDD:276809 8/47 (17%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..157 CDD:462433 24/137 (18%)
P4Hc 341..511 CDD:214780
Blue background indicates that the domain is not in the aligned region.

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