DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34041 and PH4alphaSG2

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster


Alignment Length:366 Identity:80/366 - (21%)
Similarity:153/366 - (41%) Gaps:78/366 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 LSVGL--IIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALIDLAT 301
            |.:|:  :|:::..:|.|...|:...:  ::.:::|.::....:|:   |::.|.:|    ....
  Fly     7 LYIGIFQLIIWVGVANGEFYSSVDSMQ--DLAQVEEELLNATRSYV---ESQQKQLD----FYRR 62

  Fly   302 YHIQFERDKLAIASS---------PVASYSLIHHMQSDWTH--WQLFLQEDPGKDELASLMSIKK 355
            |..|.:|:.....|.         |:.::.||..:..||..  ::..|..:..::..|.:..:.:
  Fly    63 YVEQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSR 127

  Fly   356 YL--PTKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMS 418
            .|  |.::::.....|::::...|.:...|:|:|:|.|  ..|.|.                 :.
  Fly   128 DLGYPDQSELQGAIKGLARLQKVYNLATSDLADGIIGG--LNYGSD-----------------LR 173

  Fly   419 LRDCVALSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTL--- 480
            .|:|..:.....::.:|.:|.|||.||..:|.:|...:   ..||.||.....|....|:.|   
  Fly   174 WRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPREE---KDADHYLSDIREYASMANFELGNP 235

  Fly   481 --ALETVEFALKSNP-RNAQLIRMQKRLSYHILLGPPKSPKLNIE-------NNDYRL------- 528
              |...:...|:|.| .:||  :.||.|...:       |..|::       :|..||       
  Fly   236 KKAARLLSQILESQPTHSAQ--QTQKYLESRV-------PGKNVQETKPSWFSNYTRLCQGRRLP 291

  Fly   529 --RKNGSLYCFYDTKIRTFYSLLAPIKAEVLFIDPLVILYH 567
              |....|.|:.|.| |..|..|||::.|.:.:||.:.:||
  Fly   292 EERSGDPLRCYLDGK-RHAYFTLAPLQVEPVHLDPDINVYH 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 24/143 (17%)
LapB <435..>505 CDD:442196 24/75 (32%)
TPR repeat 452..491 CDD:276809 10/43 (23%)
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 25/145 (17%)
CpoB <178..263 CDD:441335 25/89 (28%)
P4Hc 335..503 CDD:214780
Blue background indicates that the domain is not in the aligned region.

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