DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34041 and phy-2

DIOPT Version :10

Sequence 1:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:382 Identity:76/382 - (19%)
Similarity:139/382 - (36%) Gaps:111/382 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 CILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDEALIDLAT 301
            |:|: ||....|..:.::.:|.|...|         :|...::.||.|...:|.       ||..
 Worm     8 CLLA-GLAHADLFTAIADLQHMLGAEK---------DVTTIIDQYIEAERARLD-------DLRR 55

  Fly   302 Y-HIQFERDKLA------IASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASL------MSI 353
            | |....|:..|      ..::|:.:|.||..:.::|...:..:..:.....|.::      ..:
 Worm    56 YAHEYVHRNAHAESVGPEFVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEV 120

  Fly   354 KKYLPTKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMS 418
            |  .|.:.|:|.....:.::.:.|.:...|::||:|.|                 |.:.|:  :|
 Worm   121 K--FPGEEDLSGAATALLRLQDTYSLDTLDLSNGIIGG-----------------EKVSNK--LS 164

  Fly   419 LRDCVALSDHSMEMKDYNKSKEWLNVAISMLESSAYWDPIVPSADLYLKLAEVYVKQQNWTLALE 483
            ..|...:...:...|||.....|:.||:..:|:..  .|.:...::...||....:|.|...||.
 Worm   165 GHDTFEVGRSAYNQKDYYHCLMWMQVALVKIENEN--PPTIEEWEILEYLAYSLYQQGNVRRALS 227

  Fly   484 TVEFALK---SNPRNAQLIR------------------MQKRLSYHILLG------------PPK 515
            ..:...|   ::||....::                  :.||:.|..::.            ||.
 Worm   228 LTKRLAKIAPNHPRAKGNVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPV 292

  Fly   516 SPKLNIENNDYRLRKNGSLYCFYDTKIRTF------YSLLAPIKAEVLFIDPLVILY 566
            .||                   :..|:|.:      :..|||||.|:|..|||.:|:
 Worm   293 EPK-------------------WKNKLRCYLKRDKPFLKLAPIKVEILRFDPLAVLF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 27/143 (19%)
LapB <435..>505 CDD:442196 16/90 (18%)
TPR repeat 452..491 CDD:276809 8/41 (20%)
phy-2NP_502317.1 P4Ha_N 21..156 CDD:462433 29/152 (19%)
P4Hc 335..508 CDD:214780
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.