DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and htr6

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_009295353.2 Gene:htr6 / 568269 ZFINID:ZDB-GENE-030131-7839 Length:540 Species:Danio rerio


Alignment Length:331 Identity:96/331 - (29%)
Similarity:140/331 - (42%) Gaps:85/331 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 TFELLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIISVQRN 167
            :|...||:....:..||.           .|| |:::|      |.|||....||.|:|..|..:
Zfish    91 SFNDSSTISDGWSIGGSG-----------PWL-LAVML------SLIILVTACGNILLIALVFAH 137

  Fly   168 RKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLC 232
            |.||..:|.|:|||.::|::|||..|. .|.:.:..|.|:..|..|.|:...||...:||||:||
Zfish   138 RSLRCTSNCFLVSLFLSDLMVALVVMP-PAMLNVLCGTWVLAPGFCPVWLCFDVMCCSASILNLC 201

  Fly   233 CISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYT-------TEE----- 285
            .||:|||..|:.||.|..:||......::...|.|.||.||.||.:.|::       ||:     
Zfish   202 VISLDRYLLIISPLRYKQHMTPPRALLLVGGAWGLAALTSFLPIKMDWHSLGRMQELTEDDPGNA 266

  Fly   286 -HLREISLHPD-------------QCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQR 336
             ||.  |.:|.             ||...|...:||:::.::|::|...:...|.||...|.||.
Zfish   267 THLN--SFYPSSYFQLSSSGMPSTQCRLRVTLPFALVATFLTFFLPSTAICFTYCRILLAARRQA 329

  Fly   337 KAL----------------SRTSSNILLNSVHMGHT---------QQPTSLSYLHPSDCDLNATS 376
            :.:                ||..|        .||.         |:|..|.:     ..|:..|
Zfish   330 RQVEALTHPAYPQHSLGEPSRPPS--------PGHAIQDGDDYSHQEPPGLRH-----APLSVNS 381

  Fly   377 AREETH 382
            .|...|
Zfish   382 ERRLAH 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 75/221 (34%)
TM helix 1 142..167 CDD:320194 9/24 (38%)
TM helix 2 174..200 CDD:320194 11/25 (44%)
TM helix 3 213..243 CDD:320194 15/29 (52%)
TM helix 4 255..278 CDD:320194 8/22 (36%)
TM helix 5 302..331 CDD:320194 7/28 (25%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
htr6XP_009295353.2 None
Blue background indicates that the domain is not in the aligned region.

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