DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and adra2c

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_997522.1 Gene:adra2c / 266752 ZFINID:ZDB-GENE-021010-3 Length:432 Species:Danio rerio


Alignment Length:338 Identity:107/338 - (31%)
Similarity:164/338 - (48%) Gaps:45/338 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SYLSSDSTFELLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALV 160
            ||.|.:.|:            ..:|......:....|:...:::.|.|.: |.:||..::||.||
Zfish     5 SYASEEDTY------------TDTDFTPSGNSTNSTSYSPATIIGLAGLV-SFLILFTIVGNVLV 56

  Fly   161 IISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFST 225
            :|:|..:|.|:...|.|:||||.||:|||...:.|:.:.||. |.|.||...||:|.:|||.|.|
Zfish    57 VIAVLTSRALKPPQNLFLVSLASADILVATLIIPFSLANELM-GYWFFGEVWCNIYLALDVLFCT 120

  Fly   226 ASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREI 290
            :||:|||.||:|||:::.:.:||.|..|.:.|..|:..||::.|:|||.|:......|.:..|.:
Zfish   121 SSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKGMIVVVWLISAVISFPPLISMDRNTVDERRPM 185

  Fly   291 SLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGH 355
                  |....:..|.|.||..||:.|.::|:::|.||::.|..:.:.:|....:      ..|.
Zfish   186 ------CQLNDHTWYILYSSIGSFFAPCVIMILVYIRIYQVAKTRTRNMSEKRRD------PDGG 238

  Fly   356 TQQPTSLSYLHPSDCDLNATSAREETHSALSNLEDMLQPATDEDD----DRDECDEL-------R 409
            :..|...:.|...|      |.||..|.:.|..|  .:||.|..|    |....||.       .
Zfish   239 SGTPRLENGLSRED------SRRENGHCSSSPGE--RKPAEDNPDADLEDSSSSDEKAKRSQNET 295

  Fly   410 VPSPPPRRLSRSS 422
            .||...||.||.:
Zfish   296 APSKKDRRSSRKN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 76/195 (39%)
TM helix 1 142..167 CDD:320194 10/24 (42%)
TM helix 2 174..200 CDD:320194 12/25 (48%)
TM helix 3 213..243 CDD:320194 18/29 (62%)
TM helix 4 255..278 CDD:320194 9/22 (41%)
TM helix 5 302..331 CDD:320194 11/28 (39%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
adra2cNP_997522.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 5/34 (15%)
7tmA_alpha2C_AR 36..420 CDD:320446 101/295 (34%)
TM helix 1 37..63 CDD:320446 11/26 (42%)
TM helix 2 70..96 CDD:320446 12/25 (48%)
TM helix 3 108..138 CDD:320446 18/29 (62%)
TM helix 4 150..173 CDD:320446 9/22 (41%)
TM helix 5 191..220 CDD:320446 11/28 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..342 24/99 (24%)
TM helix 6 347..377 CDD:320446
TM helix 7 388..413 CDD:320446
Blue background indicates that the domain is not in the aligned region.

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