DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Chrm3

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_036659.2 Gene:Chrm3 / 24260 RGDID:2343 Length:589 Species:Rattus norvegicus


Alignment Length:523 Identity:123/523 - (23%)
Similarity:224/523 - (42%) Gaps:105/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TAAAKTTTTPTSSLP-ITSQFVDA-SLTSLSLTATSSDASY--SSPFSSYLSSDSTFELLSTVGP 112
            |..:.:||:|.  .| |:|.:|.: |...|.|...:...||  |....::.|:|::.:.|     
  Rat     2 TLHSNSTTSPL--FPNISSSWVHSPSEAGLPLGTVTQLGSYNISQETGNFSSNDTSSDPL----- 59

  Fly   113 NITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYF 177
                .|..|           |..:.:..|.||    :.|..::||.|||::.:.|::|:.:.|||
  Rat    60 ----GGHTI-----------WQVVFIAFLTGF----LALVTIIGNILVIVAFKVNKQLKTVNNYF 105

  Fly   178 VVSLAMADMLVALCAMT-FNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYA 241
            ::|||.||:::.:.:|. |...:.::  :|..|...|:::.|:|...|.||:::|..||.|||::
  Rat   106 LLSLACADLIIGVISMNLFTTYIIMN--RWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFS 168

  Fly   242 IVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQC--SFVVNKA 304
            |.|||.|....|.|....|:...|:: :.:.:.|..|.|   :..:.:.::.|.:|  .|:....
  Rat   169 ITRPLTYRAKRTTKRAGVMIGLAWVI-SFVLWAPAILFW---QYFVGKRTVPPGECFIQFLSEPT 229

  Fly   305 YALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSYLHPSD 369
            ....::..:|::|..:|.::||||:||..::.|.|:...::          ..:..:.:::||:.
  Rat   230 ITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQAS----------GTEAEAENFVHPTG 284

  Fly   370 CDLNAT-----------SAREE---------THSALSNLEDMLQPATDED--DDRDECDELRVPS 412
            ...:.:           |:|.:         |.|...:.|.|.|..:..|  ::.|....|.   
  Rat   285 SSRSCSSYELQQQGVKRSSRRKYGRCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAAASLE--- 346

  Fly   413 PPPRRLSRSSIDLRDLEQER---YEKVTHTDSAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGK 474
                  :.:|.|..|:..|.   |..|.......|::. ..:.||.:.||    |.|..:.|   
  Rat   347 ------NSASSDEEDIGSETRAIYSIVLKLPGHSSILN-STKLPSSDNLQ----VSNEDLGT--- 397

  Fly   475 MIPSKELDKEHSHPNGPQQQLSLTSGSG-NSEPE----PESTAYRVFGGLNSDESEGNDLYDTHL 534
                  :|.|.   |..:.|...:.|.| |.:.:    |......|..|..||.:...|.....|
  Rat   398 ------VDVER---NAHKLQAQKSMGDGDNCQKDFTKLPIQLESAVDTGKTSDTNSSADKTTATL 453

  Fly   535 PLA 537
            ||:
  Rat   454 PLS 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 58/198 (29%)
TM helix 1 142..167 CDD:320194 8/24 (33%)
TM helix 2 174..200 CDD:320194 10/26 (38%)
TM helix 3 213..243 CDD:320194 12/29 (41%)
TM helix 4 255..278 CDD:320194 4/22 (18%)
TM helix 5 302..331 CDD:320194 7/28 (25%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Chrm3NP_036659.2 7tmA_mAChR_M3 65..>269 CDD:320426 62/213 (29%)
TM helix 1 69..95 CDD:320426 9/29 (31%)
TM helix 2 102..129 CDD:320426 10/26 (38%)
TM helix 3 140..170 CDD:320426 12/29 (41%)
TM helix 4 182..205 CDD:320426 4/23 (17%)
TM helix 5 227..256 CDD:320426 7/28 (25%)
Basolateral sorting signal. /evidence=ECO:0000250 274..280 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..356 8/41 (20%)
7tm_GPCRs <483..563 CDD:475119
TM helix 6 489..511 CDD:320426
TM helix 7 522..547 CDD:320426
Blue background indicates that the domain is not in the aligned region.

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