DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and Adra1d

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_038488.4 Gene:Adra1d / 11550 MGIID:106673 Length:562 Species:Mus musculus


Alignment Length:398 Identity:117/398 - (29%)
Similarity:179/398 - (44%) Gaps:94/398 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 STVGPNITANGSDIAVDNQAELEESWLDLS-----------LLLLK-----GFIFSSIILAAVLG 156
            :|.|..:...||  ..|||:...|:....|           |::..     |...::.||.||.|
Mouse    45 ATGGSAVVGTGS--GEDNQSSTAEAGAAASGEVNGSAAVGGLVVSAQGVGVGVFLAAFILTAVAG 107

  Fly   157 NALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDV 221
            |.|||:||..||.|:.:||||:|:||:||:|::...:.|:|::|:. |.|.||...|:|:.::||
Mouse   108 NLLVILSVACNRHLQTVTNYFIVNLAVADLLLSAAVLPFSATMEVL-GFWAFGRTFCDVWAAVDV 171

  Fly   222 YFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEH 286
            ...|||||.||.||||||..:...|:||..||.:....:||.:|.:..::|..|: |||      
Mouse   172 LCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAAAILALLWAVALVVSVGPL-LGW------ 229

  Fly   287 LREISLHPDQ--CSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLN 349
              :..:.||:  |.......||:.||..||::|..|::|||.|::        .::|:::    .
Mouse   230 --KEPVPPDERFCGITEEVGYAIFSSVCSFYLPMAVIVVMYCRVY--------VVARSTT----R 280

  Fly   350 SVHMGHTQQPTSLS----YLHPSDCDLNATSAREETHSALSNLEDMLQPATDEDDDRDECDELRV 410
            |:..|..::|...|    .:|   |...||||:.             .|.|.....         
Mouse   281 SLEAGIKREPGKASEVVLRIH---CRGAATSAKG-------------NPGTQSSKG--------- 320

  Fly   411 PSPPPRRLSRSSIDLRDLEQERYEKVTHTDSA----------PSMMALQQQQPSHN---QLQPPA 462
                  ...|||:.:|.|:..|.:|...|.:.          |....|    |..:   ||:|..
Mouse   321 ------HTLRSSLSVRLLKFSREKKAAKTLAIVVGVFVLCWFPFFFVL----PLGSLFPQLKPSE 375

  Fly   463 PVFNPQIW 470
            .||....|
Mouse   376 GVFKVIFW 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 77/202 (38%)
TM helix 1 142..167 CDD:320194 12/29 (41%)
TM helix 2 174..200 CDD:320194 12/25 (48%)
TM helix 3 213..243 CDD:320194 17/29 (59%)
TM helix 4 255..278 CDD:320194 5/22 (23%)
TM helix 5 302..331 CDD:320194 12/28 (43%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
Adra1dNP_038488.4 7tm_GPCRs 91..407 CDD:475119 107/350 (31%)
TM helix 1 93..117 CDD:410628 12/23 (52%)
TM helix 2 126..148 CDD:410628 10/21 (48%)
TM helix 3 164..186 CDD:410628 11/21 (52%)
TM helix 4 209..225 CDD:410628 4/15 (27%)
TM helix 5 246..269 CDD:410628 10/22 (45%)
TM helix 6 341..363 CDD:410628 3/25 (12%)
TM helix 7 375..400 CDD:410628 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.

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