DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and chrm5

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_017952476.1 Gene:chrm5 / 100498518 XenbaseID:XB-GENE-986590 Length:525 Species:Xenopus tropicalis


Alignment Length:445 Identity:104/445 - (23%)
Similarity:188/445 - (42%) Gaps:98/445 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PNITA-NGSDIAVDNQAELEESWLDLSLLLLKGFIFSSII-LAAVLGNALVIISVQRNRKLRVIT 174
            ||.|: |.|:..|..:|  ...|..:::..:     |:|: |..::||.||::|.:.|.:|:.:.
 Frog     3 PNSTSLNNSNGTVPLKA--HSLWEVITIATV-----SAIVSLITIVGNILVMVSFKVNSQLKTVN 60

  Fly   175 NYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRY 239
            ||:::|||.||:::.:.:|....|..|. |.|..|...|:::.:||...|.||:::|..||.|||
 Frog    61 NYYLLSLACADLIIGIFSMNLYTSYILI-GHWSLGSLACDLWLALDYVASNASVMNLLVISFDRY 124

  Fly   240 YAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQC--SFVVN 302
            ::|.|||.|....|.|....|:...|.: :.|.:.|..|.|   :..:...::.|::|  .|:..
 Frog   125 FSITRPLTYRAKRTPKRAGLMIGLAWFI-SFILWAPAILCW---QYFVGGRTVPPEECQIQFLYE 185

  Fly   303 KAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSYLHP 367
            ......::..:|::|..||.::|.||:||..::.|.|:....:   .||......:|....:...
 Frog   186 PIITFGTAIAAFYLPVSVMTILYCRIYKETEKRTKDLAELQGS---ESVADFEMMRPQGTLFKSC 247

  Fly   368 SDCDLNATSAREETHSALSN----------------------LEDML-----QPATDEDDDRDEC 405
            ..|.....:.||...::.|:                      .||.|     .|::|::|.:.: 
 Frog   248 FSCKQQTRTKRERCQASWSSSSRSTTTTVKITHSPNTCNEWIKEDQLTTCSSYPSSDDEDKQTK- 311

  Fly   406 DELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTDSAPSMMALQQQQPSHNQLQPPAPVFNPQIW 470
                                ..:.|..||..|..         |:::                  
 Frog   312 --------------------EAVFQGAYENQTEA---------QKEE------------------ 329

  Fly   471 TEGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNSEPEPESTAYRVFGGLNSDESE 525
             |.|.|.:||   :....|...::..||.|.|:|:..|:..:|:....:|.|.|:
 Frog   330 -ETKQILTKE---QPGLSNYESERFFLTPGKGHSQKSPKCVSYKFRIVVNDDGSQ 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 60/198 (30%)
TM helix 1 142..167 CDD:320194 8/25 (32%)
TM helix 2 174..200 CDD:320194 9/25 (36%)
TM helix 3 213..243 CDD:320194 12/29 (41%)
TM helix 4 255..278 CDD:320194 5/22 (23%)
TM helix 5 302..331 CDD:320194 7/28 (25%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
chrm5XP_017952476.1 7tm_GPCRs 26..>220 CDD:475119 60/203 (30%)
TM helix 1 28..52 CDD:320427 8/28 (29%)
TM helix 2 61..83 CDD:320427 8/21 (38%)
TM helix 3 99..121 CDD:320427 7/21 (33%)
TM helix 4 144..160 CDD:320427 3/16 (19%)
TM helix 5 186..209 CDD:320427 4/22 (18%)
7tm_GPCRs <423..502 CDD:475119
TM helix 6 429..451 CDD:320426
TM helix 7 462..487 CDD:320426
Blue background indicates that the domain is not in the aligned region.

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