DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and LOC100488258

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_012818683.1 Gene:LOC100488258 / 100488258 XenbaseID:XB-GENE-29079119 Length:333 Species:Xenopus tropicalis


Alignment Length:243 Identity:86/243 - (35%)
Similarity:122/243 - (50%) Gaps:28/243 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 IFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFG 209
            :|.:|||..| ||.|||||:...|:|...||:.::|||.||.|:.|..|.::....|: ..|.||
 Frog    29 MFGAIILTTV-GNLLVIISISHFRQLHYPTNFLILSLATADFLIGLVVMPYSMVRSLT-SCWYFG 91

  Fly   210 PFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFT 274
            ...|.|::.||:...|.||.||..||||||||:..||.|..|:|...:...|...|.:..:.||.
 Frog    92 DLFCKVHSCLDMTLCTGSIYHLFFISVDRYYAVCHPLHYYKNLTTNVIELFLLTTWSVSCVFSFG 156

  Fly   275 PIFLGWYTTEEHLRE-ISLH--PDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQR 336
            .:|...:|  |.::: |:.:  ...||..:||.:..|||.:.|:|||.:|:.:|..||..|..|.
 Frog   157 LVFSNVHT--EGIQDYITSYYCIGSCSLTLNKLWGTISSLICFFIPGALMIGIYMHIFSVARNQA 219

  Fly   337 KALSRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREETHSA 384
            |.            ||..|:.||         |...:..|.|.|..:|
 Frog   220 KL------------VHNHHSFQP---------DKSKSKISVRAERKAA 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 75/195 (38%)
TM helix 1 142..167 CDD:320194 12/21 (57%)
TM helix 2 174..200 CDD:320194 10/25 (40%)
TM helix 3 213..243 CDD:320194 17/29 (59%)
TM helix 4 255..278 CDD:320194 4/22 (18%)
TM helix 5 302..331 CDD:320194 13/28 (46%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
LOC100488258XP_012818683.1 7tmA_TAAR2_3_4 23..311 CDD:320437 86/243 (35%)
TM helix 1 24..50 CDD:320437 12/21 (57%)
TM helix 2 57..83 CDD:320437 10/25 (40%)
TM helix 3 95..125 CDD:320437 17/29 (59%)
TM helix 4 137..160 CDD:320437 4/22 (18%)
TM helix 5 185..214 CDD:320437 13/28 (46%)
TM helix 6 240..270 CDD:320437 3/7 (43%)
TM helix 7 279..304 CDD:320437
Blue background indicates that the domain is not in the aligned region.

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