DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octbeta3R and LOC100487086

DIOPT Version :10

Sequence 1:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_002932739.1 Gene:LOC100487086 / 100487086 -ID:- Length:408 Species:Xenopus tropicalis


Alignment Length:465 Identity:126/465 - (27%)
Similarity:189/465 - (40%) Gaps:125/465 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 LSSDSTFELLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIILAAVLGNALVII 162
            |:|..||       |.:.:||:            :||.|:...:.|.:.|.:|:..|.||.||||
 Frog     7 LNSTGTF-------PEVDSNGT------------TWLSLTQRWMLGAVLSFMIMVIVFGNMLVII 52

  Fly   163 SVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTAS 227
            ::.:..:|:.:||.|:.|||.||:::.|..:...|:: |..|.|:|...:|.::.|:||...|||
 Frog    53 AIAKTPRLQTMTNVFITSLACADLIMGLLVVPPGATI-LVTGDWLFETTVCELWTSVDVLCVTAS 116

  Fly   228 ILHLCCISVDRYYAIVRPLEYPLNMT----HKTVCFMLANVWILPALISFTPIFLGWY--TTEEH 286
            |..||.|:||||.||..||:|.:.:|    ..|||.    ||.:.|||||.||...|:  |..|.
 Frog   117 IETLCVIAVDRYIAITSPLKYEMLVTKVRARLTVCL----VWAISALISFLPIMNRWWRDTHNEE 177

  Fly   287 LREISLHPDQCSFVVNKAYALISSSVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSV 351
            .:....:|..|.||.|..||::||::||::|.::|:.:|.|:|..|.||.:.:.:       :.|
 Frog   178 AKSCYDNPKCCDFVTNMPYAIVSSTISFYVPLVIMIFVYVRVFIVATRQVRLIEK-------DKV 235

  Fly   352 HMGHTQQPTSLSYLHPSDCDLNATSARE-------ETHSALSNL--------------------- 388
            ....|..||:.|         ...|.|.       :.|.||..|                     
 Frog   236 RFNGTPVPTNKS---------RRASRRRPSGLLAIKEHKALKTLGIIMGIFTLCWLPFFVANIIK 291

  Fly   389 ---------------------EDMLQP---ATDEDDDRDECDELRVPSPPPRRLSRSSIDLRDLE 429
                                 ...|.|   ....|..|.....||.|....|:|...|   :||.
 Frog   292 VFCRSFIDDNVFLFLNWLGYINSGLNPIIYCRSPDFRRAFRKLLRCPRTVDRKLHALS---KDLN 353

  Fly   430 QERYEKVTHTDSAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQQQ 494
            :..|...||.|..........|:|.:..|                        ...|..:...::
 Frog   354 RYPYTSGTHLDCDGIKQVPDGQEPGNGSL------------------------SSSSRCSSRTEE 394

  Fly   495 LSLTSGSGNS 504
            .||.:|:.||
 Frog   395 TSLKNGNANS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 80/201 (40%)
TM helix 1 142..167 CDD:320194 10/24 (42%)
TM helix 2 174..200 CDD:320194 10/25 (40%)
TM helix 3 213..243 CDD:320194 16/29 (55%)
TM helix 4 255..278 CDD:320194 12/22 (55%)
TM helix 5 302..331 CDD:320194 12/28 (43%)
7tm_GPCRs <1161..1234 CDD:475119
TM helix 6 1167..1189 CDD:410628
TM helix 7 1202..1227 CDD:410628
LOC100487086XP_002932739.1 7tmA_Beta3_AR 30..331 CDD:320625 95/321 (30%)
TM helix 1 31..57 CDD:320625 10/25 (40%)
TM helix 2 64..91 CDD:320625 10/27 (37%)
TM helix 3 102..132 CDD:320625 16/29 (55%)
TM helix 4 146..164 CDD:320625 10/21 (48%)
TM helix 5 193..225 CDD:320625 13/31 (42%)
TM helix 6 261..291 CDD:320625 4/29 (14%)
TM helix 7 300..325 CDD:320625 2/24 (8%)
Blue background indicates that the domain is not in the aligned region.

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