DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8560 and Agtpbp1

DIOPT Version :10

Sequence 1:NP_648120.3 Gene:CG8560 / 38830 FlyBaseID:FBgn0035781 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001099570.1 Gene:Agtpbp1 / 290986 RGDID:1306307 Length:1219 Species:Rattus norvegicus


Alignment Length:302 Identity:51/302 - (16%)
Similarity:102/302 - (33%) Gaps:99/302 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VALAVENYDGYKIYDINARNAFEKQLLLRLSG---NEAYDF--------------------FDLP 55
            :.:....||.....|||: |.:.:.....:||   ..||.|                    :.:.
  Rat   718 IQIRKSEYDLILNSDINS-NHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQ 781

  Fly    56 RSLDAS-----------------SRVMVKPEDQEGFEHLLEKYGVNYSVINENFGESLRQERDEN 103
            .:|:|.                 ||..|....|:|..:    |.:.::|:..:        :|: 
  Rat   782 EALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSY----YTITFTVVFPH--------KDD- 833

  Fly   104 QNQRLMNLRSAERSVSFKAFH---RHAEINAYLDELAAAY-PSRVSVQ--VAGKSYENRDIKTIT 162
                          |.:.|:|   .::.:..:|.:|.:|: |.::..:  |..::........:|
  Rat   834 --------------VCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCETLSGNSCPLVT 884

  Fly   163 ITNGDGKT---------GKNVVFLDAGIHARE----WIAHAGALYVIHQLVENFAANSELLKDFD 214
            ||.....:         .:..:||.|.:|..|    |:...    .:..|:.|......|.:.:.
  Rat   885 ITAMPESSYYEHICQFRTRPYIFLSARVHPGETNASWVMKG----TLEYLMSNSPTAQSLREAYI 945

  Fly   215 WVILPVVNPDG-YEYSHTTT-------RMWRKTRKPISSACY 248
            :.|:|::|||| ...:|..:       |.|:.....:....|
  Rat   946 FKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPNPELHPTIY 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8560NP_648120.3 Propep_M14 27..99 CDD:460505 18/111 (16%)
M14_CP_A-B_like 123..414 CDD:349433 28/153 (18%)
Agtpbp1NP_001099570.1 Pepdidase_M14_N 705..839 CDD:407865 22/148 (15%)
M14_Nna1 862..1132 CDD:349477 23/130 (18%)

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