DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8560 and cpo

DIOPT Version :10

Sequence 1:NP_648120.3 Gene:CG8560 / 38830 FlyBaseID:FBgn0035781 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001139101.1 Gene:cpo / 100005630 ZFINID:ZDB-GENE-070619-6 Length:363 Species:Danio rerio


Alignment Length:310 Identity:116/310 - (37%)
Similarity:170/310 - (54%) Gaps:10/310 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RSVSFKAFHRHAEINAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKTGKNVVFLDAG 180
            :|..:..:|...||:|:::::....|..||....|::||.|:|..:.| .....|.|..:::|.|
Zfish    28 KSYDYTKYHTMDEISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKI-GFSSTTPKKAIWMDCG 91

  Fly   181 IHAREWIAHAGALYVIHQLVENFAANSE---LLKDFDWVILPVVNPDGYEYS--HTTTRMWRKTR 240
            ||||||||.|...:.:.:::.::..:|.   |.|:.|:.|.||:|.|||.||  :.:||:|||:|
Zfish    92 IHAREWIAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSR 156

  Fly   241 KPI--SSACYGTDANRNFDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYL 303
            .|.  :|.|.|||.||||..:||.||.|...||:.:.|.||.||||.:.:.|.|.:.......||
Zfish   157 SPCHENSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYL 221

  Fly   304 TLHSYGNYLLYPWGWTSALPSSWRDNDEVAQGGADAIKSATGTKYTVGSSTNVLYAAAGGSDDYA 368
            |:||||..:|.|:|..:....::.:..||....|.|||:..|..|.||||.:|||..:|.|.|:|
Zfish   222 TIHSYGQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFA 286

  Fly   369 FGVANFPVSITMEL-PAGGTGFNPSTSQIEGFVSETWVGIKAMAQKVADK 417
             .:...|.|.|.|| ..|..||.....||:....|.:.|..::...|.||
Zfish   287 -RLIGIPYSFTFELRDEGQHGFILPEDQIQPTCQEAYEGAMSIINYVHDK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8560NP_648120.3 Propep_M14 27..99 CDD:460505
M14_CP_A-B_like 123..414 CDD:349433 112/298 (38%)
cpoNP_001139101.1 M14_CPO 32..332 CDD:349466 112/301 (37%)
Blue background indicates that the domain is not in the aligned region.

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