DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment smid and ftsh9

DIOPT Version :9

Sequence 1:	NP_523959.2	Gene:	smid / 38824	FlyBaseID:	FBgn0016983	Length:	944	Species:	Drosophila melanogaster
Sequence 2:	NP_568892.1	Gene:	ftsh9 / 836004	AraportID:	AT5G58870	Length:	806	Species:	Arabidopsis thaliana

Alignment Length:	427	Identity:	138/427 - (32%)
Similarity:	202/427 - (47%)	Gaps:	61/427 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   494 VTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGD--------KETSAKDKSEGDSPNIETP 550
            :.|...||........||.|.......:.|. |||:.|        |:.....:||..|.:|:..
plant   160 IPLPGSEPRTQTTFMSVPYSDFLSKVNNDEV-QKVEVDGFHVLFKLKDDGNLQESETSSSSIKLS 223

  Fly   551 KKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSSNDE---------- 605
            :.:.....|: :|.|....|..:|.|..      .|.|  |.:|..|:..|.:..
plant   224 ESSETMLRSV-APTKRVVYSTTRPRDIK------TPYE--KMLENNVEFGSPDKRSGGFFNSGLI 279

  Fly   606 --YYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREGFI-----TVPDTTWDD 663
              :|   :|.|...|...|..|:...        ...::..:......|.:     |:   |:.|
plant   280 VLFY---IAVLAGLLHRFPVNFSQST--------TGQLRTRKSGGPGGGKVSGDGETI---TFAD 330

  Fly   664 IGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVK 728
            :..:::.:|||: .::..:|.|:...|||...|.||||.|.||.||||||||:|.|:.:.|||..
plant   331 VAGVDEAKEELE-EIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCS 394

  Fly   729 GPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDG------NNSGTRIVNQ 787
            ..|.:.:|||.....||..|.||:..||.:||.||.|::...|    ||      |:...:.:||
plant   395 ASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSR----DGKFRMVSNDEREQTLNQ 455

  Fly   788 LLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPV 852
            |||||||.:....|.:|.||||.|::|||:.||||.|.::.|..|::..|..|||......:.|
plant   456 LLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELP- 519

  Fly   853 LADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQS 889
            |.|||:|..||:.|.|:||||||.||.:|::.:.|:|
plant   520 LGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKS 556

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	138/427 (32%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	20/36 (56%)
		AAA	699..830	CDD:278434	63/136 (46%)
ftsh9	NP_568892.1	FtsH_fam	322..759	CDD:273520	103/244 (42%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910