DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment smid and AT3G27120

DIOPT Version :9

Sequence 1:	NP_523959.2	Gene:	smid / 38824	FlyBaseID:	FBgn0016983	Length:	944	Species:	Drosophila melanogaster
Sequence 2:	NP_001319654.1	Gene:	AT3G27120 / 822331	AraportID:	AT3G27120	Length:	680	Species:	Arabidopsis thaliana

Alignment Length:	740	Identity:	190/740 - (25%)
Similarity:	306/740 - (41%)	Gaps:	146/740 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   263 LCEMLIHIKSPEFYF------QLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELI 321
            :|..::.....||.|      .||....|             .:|...|.....||:..|...|.
plant     1 MCGSVVSDSEREFEFHFWGFGHLGKEEER-------------IMAGKRSSPFSSPLLRPPPEFLN 52

  Fly   322 GGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDNLKANEF 386
            ....||:|             :||  :..|:|           :..:|:.|.|..:...|:.::|
plant    53 VKEEGETE-------------TPC--WRKEVD-----------ENLKRLQSLLFGADKFLEKSDF 91

  Fly   387 GQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHI------PSRKERREILRIQCEGLSVDPKLNY 445
            ..:.::            |||.:|..|.......      |.|:|....:.:..|||..|.....
plant    92 SSAQIL------------GLRLLGFLDSRSVTDADRDFIGPIRREVASKIDLALEGLVSDSDRKA 144

  Fly   446 DKIAELTPGYVGADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPV 510
            .::|...||       |:........|::....|:...| .|:.|...|...::....|......
plant   145 FELANTAPG-------AIFGSKGGFDVEKIKQSKYFGFH-VSQSNGKGVKEMEERHDTDKLIPKA 201

  Fly   511 PDS--KGEETAKDAEAEQKVDGDKETSAK------------DKSEG-----DSPNIETPKKATNG 556
            |.|  :.:.|:....:..|.|..::||..            ::|.|     ..|:.||...|.:|
plant   202 PKSMMQAKLTSLYGNSIGKPDNQRKTSVNNQDRASDECVIVERSHGFGFGTKRPHAETSSLANDG 266

  Fly   557 ------------NSSIKSPQKTPKK--SAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSS----- 602
                        ::.||......:|  |.|.|:..      ::|:..|.|:.:...|.|.
plant   267 EVKEDGAPNGFVSAKIKLEMDVRQKRGSTESPSSC------LSPQSDKNALGRGYGSRSGGLRRG 325

  Fly   603 -NDEYYEP------TLAELTNFLDNPPEEFADPN--FCLTLI-----DFVDAIKVMQP----SAK 649
             ...:..|      .:..||:.:....::..|.:  .||.::     :..:.::.::|    ...
plant   326 YRSNFVPPVKTNGNNVGNLTSRIGGKTDDALDDSTRTCLEMLCGPDGELPEKLRNLEPRLIEHVS 390

  Fly   650 REGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAP-SGVLLCGPPGCGKTLLA 713
            .|.....|:..||||..||..::.:...|:.|:..|::.:  |..:| .|:||.||||.|||::.
plant   391 NEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIG 453

  Fly   714 KAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGN 778
            ||||.||...|..:....|.:.::||.|:.|||.|..|....|.|||.||.|||..:|...|: :
plant   454 KAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGE-H 517

  Fly   779 NSGTRIVNQLLTEMDGVEE-RKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILK 842
            .|..|:..|.|.||:|.:. .:.:.::.|||||..:|.|..|  ||...||:..|....|..|::
plant   518 ESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQ 580

  Fly   843 ATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNG--DTNL--DDL-CV 902
            ...|......|:|| |::.|...||||:|:|:..|||.|:|..||::|..|  .|||  ||: .|
plant   581 NLLKKDGLFTLSDD-DMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLV 644

  Fly   903 RSQHFQEALQQLRPSVNEQDRKIYD 927
            ..|.|::|||::||||::.:..||:
plant   645 TLQDFKDALQEVRPSVSQNELGIYE 669

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	186/722 (26%)
		AAA	287..418	CDD:278434	23/130 (18%)
		P-loop_NTPase	679..>716	CDD:304359	15/37 (41%)
		AAA	699..830	CDD:278434	55/131 (42%)
AT3G27120	NP_001319654.1	SpoVK	<376..671	CDD:223540	111/300 (37%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900