DRSC/TRiP Functional Genomics Resources

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Protein Alignment smid and AgaP_AGAP012655

DIOPT Version :9

Sequence 1:NP_523959.2 Gene:smid / 38824 FlyBaseID:FBgn0016983 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_001230510.1 Gene:AgaP_AGAP012655 / 4397685 VectorBaseID:AGAP012655 Length:787 Species:Anopheles gambiae


Alignment Length:731 Identity:222/731 - (30%)
Similarity:336/731 - (45%) Gaps:198/731 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 LYQQLHQNQSRDRLRKFKRDLEV---------QHPTE----SFRDIGGMDST---LKELCEMLIH 269
            |..||::...:|||....|..:|         ||..:    |..:|||:|:|   ||||.||...
Mosquito   226 LTDQLNKMSLKDRLYVILRTTKVTLLDDSKAAQHSHQQRMFSLANIGGLDTTISELKELLEMAFG 290

  Fly   270 IKSPEFYFQLGLLP-SRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERI- 332
            :.|.    |..:.| |||:||.|..|.|||.|..|::......::.:..:|:.....||||..: 
Mosquito   291 MDSK----QTTVGPVSRGILLSGVSGVGKTMLVNALATHYHCHVVRLNCSEVFSKFYGESEANVS 351

  Fly   333 ---REVFDQAIGYSPCVLFIDEIDAIGGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIA 394
               .||||  :...|.::.::|:..:....  .:.|:.:||....::.||:|.||..|...|||.
Mosquito   352 RQFAEVFD--VHPKPAMVVVEELHNLCPKS--TATDIVKRISQHFLTLLDSLHANVRGNRAVVIG 412

  Fly   395 ATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILR--IQCEGLSVDPKLNYDKIAELTPGYVG 457
            .|...|.::|.|||.||.|:|..:.:|....|..||.  :...|.:| |:.:...:|.:|.||||
Mosquito   413 TTDSVDNVNPLLRRGGRMDYEFELPVPDAIARTAILERVLSRHGQTV-PEQDIRAVARITHGYVG 476

  Fly   458 ADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDA 522
            |||..|||:|||.|                                       |..|        
Mosquito   477 ADLENLVSKAASSA---------------------------------------PTGK-------- 494

  Fly   523 EAEQKVDGDKETSAKDKSEGDSPNIETPKKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPE 587
                .:||                                                         
Mosquito   495 ----PIDG--------------------------------------------------------- 498

  Fly   588 EPKKAVEQEVDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTLIDFVDAIKVMQPSAKREG 652
                                 |.|                          :.|::.::|||.||.
Mosquito   499 ---------------------PAL--------------------------MAALQHVKPSAMREI 516

  Fly   653 FITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIA 717
            .|..|:..|.|||..::::.:|:..:..|:.:||:.:|||:..|.|:|:.|||||.||::|||||
Mosquito   517 MIECPNVRWTDIGGQDELKLKLRQIIDWPIHHPELFDRLGIKPPRGLLMFGPPGCSKTMIAKAIA 581

  Fly   718 NEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGT 782
            .|:.:||:|:||.||.:|:|||||||||..|:|||..||.:|||||.|::..:|| ...|::...
Mosquito   582 TESRLNFLSIKGSELFSMWVGESERAVRDLFRRARQVAPSIIFFDEIDAIGGERS-AESGSSVKE 645

  Fly   783 RIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKN 847
            |::.|||||||||...|.|.|:|||||||:||.|::||||||.|:||..|:.:.|.||.:...|.
Mosquito   646 RVLAQLLTEMDGVSVLKDVRIVAATNRPDLIDRALMRPGRLDRIVYVRLPDAAAREEIFRIKLKT 710

  Fly   848 GKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDTNLDDLCVRSQHFQEALQ 912
              .|. |..|||.|:..:|.|.:|:::..:.::|::..|       :::.|...:..:||:.||.
Mosquito   711 --IPT-ASTVDLAELVRRTAGCSGSEIEAICQEAALKGL-------ESSFDVETIEWEHFEHALG 765

  Fly   913 QLRPSVNEQDRKIYDK 928
            .:||..:.:..::|::
Mosquito   766 VVRPRTSPELLRLYEE 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smidNP_523959.2 Nucleolin_bd 2..71 CDD:293330
SpoVK 271..919 CDD:223540 199/654 (30%)
AAA 287..418 CDD:278434 42/134 (31%)
P-loop_NTPase 679..>716 CDD:304359 18/36 (50%)
AAA 699..830 CDD:278434 77/130 (59%)
AgaP_AGAP012655XP_001230510.1 SpoVK 302..772 CDD:223540 196/640 (31%)
AAA 305..438 CDD:278434 42/136 (31%)
AAA 563..694 CDD:278434 78/131 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D169540at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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