Protein Alignment smid and rpt-3

DIOPT Version :9

• Sequence 1: NP_523959.2
• Gene: smid / 38824
• FlyBaseID: FBgn0016983
• Length: 944
• Species: Drosophila melanogaster
• Sequence 2: NP_498429.1
• Gene: rpt-3 / 175925
• WormBaseID: WBGene00004503
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 326
• Identity: 110/326 - (33%)
• Similarity: 181/326 - (55%)
• Gaps: 31/326 - (9%)

  Fly   585 APEEPKK-------------AVEQE--VDSSSSNDEYYEPTLAELTNFLDNPPEEFADPNFCLTL 634
            |.||.|:             ||:|.  :..|::...||...|:.|...|..|....|...:...|
 Worm    71 AQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNAL 135

  Fly   635 IDFV-----DAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLT 694
            :|.:     .:|::::|..|       ||.::.|||.|:..::|::.||..|:.:.|:.:::|:.
 Worm   136 VDVLPPEADSSIQMLRPDEK-------PDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGID 193

  Fly   695 APSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVI 759
            .|.|||:.||||||||:||||:|.....:||.|.|.|.:..|:||..|.||..|:.|:.::|.:|
 Worm   194 PPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSII 258

  Fly   760 FFDEFDSLCPKRSDGGDG-NNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRL 823
            |.||.|::..||.|...| :....||:.:||.:|||.::...|.::.||||.|.:|||:||||||
 Worm   259 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRL 323

  Fly   824 DTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQ 888
            |..:....|::.::..:.....   .|..|:|||||::..|:.:..:|||:..:.::|.|.::|:
 Worm   324 DRKIEFPLPDRRQKRLVFSTVC---SRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRE 385

  Fly   889 S 889
            :
 Worm   386 N 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smid	NP_523959.2	Nucleolin_bd	2..71	CDD:293330
		SpoVK	271..919	CDD:223540	110/326 (34%)
		AAA	287..418	CDD:278434
		P-loop_NTPase	679..>716	CDD:304359	18/36 (50%)
		AAA	699..830	CDD:278434	61/131 (47%)
rpt-3	NP_498429.1	PTZ00454	35..414	CDD:240423	110/326 (34%)
		AAA	198..331	CDD:278434	61/132 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910