Protein Alignment MED4 and med4

DIOPT Version :9

• Sequence 1: NP_648094.1
• Gene: MED4 / 38799
• FlyBaseID: FBgn0035754
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_001017883.1
• Gene: med4 / 550582
• ZFINID: ZDB-GENE-050417-438
• Length: 254
• Species: Danio rerio
• Alignment Length: 264
• Identity: 116/264 - (43%)
• Similarity: 164/264 - (62%)
• Gaps: 36/264 - (13%)

  Fly     6 STKERLLLLIDDIEMIAKELIE----QAHQKISST-ELVDLLDLLVAKDEEFRKMLELAEEQAKV 65
            |||||||..:||:|::::||||    ...||:... |...:|:||:.:|:||:::::.|.||.:|
Zfish     9 STKERLLSTLDDLEVLSRELIEMLALSRSQKLPPPGEDTLILELLIQRDKEFQELMQTALEQGRV 73

  Fly    66 EEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTAIFQARQKLASINQANKRPVSSEELIKYAHR 130
            .:.|..|..:||..|.:||:|||.||:||.||:||::||::||.||::|.|..:||:|:||||||
Zfish    74 HQEMQSLEKEVEKRDSDIQQLQKQLKEAEHILATAVYQAKEKLKSIDKARKGSISSKEIIKYAHR 138

  Fly   131 ISSANAVSAPLTWCIGDLRRPYPTDIEMRNGLLGK-SEQNINGGTVTHQNSGMPSEQQRTLSGSA 194
            ||::|||.|||.|..||.|||||||:|||:|:||. |..:.||     .|..:|.:
Zfish   139 ISASNAVCAPLNWVPGDPRRPYPTDLEMRSGMLGNMSNMSTNG-----VNGHLPGD--------- 189

  Fly   195 GSGSGSGAGGEVPNAFQNQFNWNLGELHMTMGA----SGNTVALE-----TRAQDDVEVMSTDSS 250
                 :.|.|.:|:....|:.|.  ...::||.    .||...||     ...:||||.||||||
Zfish   190 -----ALAAGRLPDVLTPQYPWQ--STDVSMGILPPHHGNDFGLEPPGHNKENEDDVEAMSTDSS 247

  Fly   251 SSSS 254
            ||||
Zfish   248 SSSS 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED4	NP_648094.1	Med4	47..189	CDD:287038	71/142 (50%)
med4	NP_001017883.1	Med4	49..>186	CDD:287038	73/141 (52%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	215..254		18/37 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170575174
Domainoid	1	1.000	149	1.000	Domainoid score	I4401
eggNOG	1	0.900	-	-		E1_KOG4552
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H8568
Inparanoid	1	1.050	189	1.000	Inparanoid score	I3878
OMA	1	1.010	-	-		QHG46272
OrthoDB	1	1.010	-	-		D1333917at2759
OrthoFinder	1	1.000	-	-		FOG0006646
OrthoInspector	1	1.000	-	-		oto39980
orthoMCL	1	0.900	-	-		OOG6_105627
Panther	1	1.100	-	-	LDO	PTHR13208
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X4874
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	14	13.810