DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED4 and MED4

DIOPT Version :10

Sequence 1:NP_648094.1 Gene:MED4 / 38799 FlyBaseID:FBgn0035754 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_054885.1 Gene:MED4 / 29079 HGNCID:17903 Length:270 Species:Homo sapiens


Alignment Length:261 Identity:113/261 - (43%)
Similarity:165/261 - (63%) Gaps:30/261 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 STKERLLLLIDDIEMIAKELIE----QAHQK-ISSTELVDLLDLLVAKDEEFRKMLELAEEQAKV 65
            ||:||||..::|:|::::||||    ..:|| :.:.|...:|:||:.:|.||:::::||..|.|:
Human    25 STRERLLSALEDLEVLSRELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKI 89

  Fly    66 EEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTAIFQARQKLASINQANKRPVSSEELIKYAHR 130
            ...|..|..:||..|.:||:|||.||:||.||:||::||::||.||.:|.|..:||||:||||||
Human    90 HHEMQVLEKEVEKRDSDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHR 154

  Fly   131 ISSANAVSAPLTWCIGDLRRPYPTDIEMRNGLLGKSEQNINGGTVTHQNSGMPSEQQRTLSGSAG 195
            ||::|||.|||||..||.|||||||:|||:||||:    :|..:....|..:|.:          
Human   155 ISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQ----MNNPSTNGVNGHLPGD---------- 205

  Fly   196 SGSGSGAGGEVPNAFQNQFNWNLGELHMTMGASGNT--VALE-----TRAQDDVEVMSTDSSSSS 253
                :.|.|.:|:....|:.|...::.|.|....::  ..||     ...:||||:|||||||||
Human   206 ----ALAAGRLPDVLAPQYPWQSNDMSMNMLPPNHSSDFLLEPPGHNKENEDDVEIMSTDSSSSS 266

  Fly   254 S 254
            |
Human   267 S 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED4NP_648094.1 Med4 47..189 CDD:401849 72/141 (51%)
MED4NP_054885.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Med4 64..>189 CDD:401849 70/124 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..270 16/50 (32%)
Blue background indicates that the domain is not in the aligned region.

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