| Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038943864.1 | Gene: | Dscam / 171119 | RGDID: | 619992 | Length: | 2034 | Species: | Rattus norvegicus |
| Alignment Length: | 2161 | Identity: | 663/2161 - (30%) |
|---|---|---|---|
| Similarity: | 1032/2161 - (47%) | Gaps: | 227/2161 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MWISSRFFVILLLLNLDNTCSEPFEAHLRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVDW 65
Fly 66 VHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVA 130
Fly 131 QAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQGDGKFHLLPTGELLI 195
Fly 196 HNLQESDESQSFRCRSMHRLTRQVVVSSPTRLRI----NSHRGIISPSVVEHTAHVQVSQDEGAV 256
Fly 257 LLCVAQGCPSPEYSWFTHNGAGPLPV-LSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGGEAS 320
Fly 321 AELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKDGRQLPSSGRVEDT- 384
Fly 385 -----LVVPRVSRENRGMYQCVVRRPEGDTFQATAELQ--LGDAPPVLLYSFIEQTLQPGPAVSL 442
Fly 443 KCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAG 507
Fly 508 RVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQ-RVQPD 571
Fly 572 GSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSV 636
Fly 637 VKGDLPLTINWRKDGRPIDPTQHMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQA 701
Fly 702 LLVNVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGN 766
Fly 767 GSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAVSG 831
Fly 832 DKPINIVWMRSGKNTLNPS-TNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQ 895
Fly 896 QLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADHSLPPALFVDQWQ 960
Fly 961 QIE-VKD-PPHFN-AMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARP 1022
Fly 1023 LSSTELLISWVAPLPELRHGDIQGYNVGYK-LSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFA 1086
Fly 1087 RYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQG 1151
Fly 1152 YKLIF-EPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSE 1215
Fly 1216 EDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSL-----YTRVVNGREELNNEKRSLPSQ 1275
Fly 1276 QAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRPWRSTVTLPC 1340
Fly 1341 TAVGKPKR--EWFKSDVALRQGGLHNSQLLD-------SGDLIISSLQLADGGNYSCQVDNGIGT 1396
Fly 1397 DRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGFTGNAPITGYTLFYRRANGNT-DEMQLSRH 1460
Fly 1461 ASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSPGHPASTALLAP-NSTSLLVRLH 1524
Fly 1525 SWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQ 1589
Fly 1590 AEFNFVTLTKDGDPPPPEIMHRGRSGQTTVIFANINLLIPTIAAVSGMFCTIIMIIVCYRH---- 1650
Fly 1651 ---MLKNAPPLAEQSQIQKESLENRANSEAAQRERYYATIHKVSMQNNDKIPETSEDISPYATFQ 1712
Fly 1713 LSEAG-GNMSQPHHGGPANTLLHSFMYHERALAEG----CSSPPPAASKNRRRHSRKTEPESEES 1772
Fly 1773 ESDQ------------------------------DQLTSSRTESSNQHEGKIKHSIIYHGAQSST 1807
Fly 1808 SSDLSPMSEQKSLPRRGRSRYHHQQYQFSTNTTPRHHNSNKMNNNTTSNTNT-TATNTTATPSTS 1871
Fly 1872 SNSNKILSPRGGNLKSISSTFKSQDS---IQCHIPTLVKSPSISTQQQKQFHKQQLQNSSTNNSQ 1933
Fly 1934 HSSSNPNSSSLKQQQPLLITPKLHQLEANGQELLGLDGIGNSPLV----ACMPPSSQFRPIPHKS 1994
Fly 1995 IMPAHEP-PHHHNHSQQSHPHQQQQQQQHPGTLLNPSTAMLSSKFFTAPTLPKXDTAN-GGSEYV 2057
Fly 2058 GGAMEA-MDGFGYDSG 2072 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dscam2 | NP_001261500.1 | Ig | 30..128 | CDD:472250 | 33/97 (34%) |
| Ig strand B | 49..53 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 62..66 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 86..90 | CDD:409353 | 3/3 (100%) | ||
| Ig strand F | 106..111 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 119..123 | CDD:409353 | 1/3 (33%) | ||
| V-set | 138..229 | CDD:462230 | 29/90 (32%) | ||
| Ig | 238..327 | CDD:472250 | 30/89 (34%) | ||
| Ig strand B | 255..259 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 268..272 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 293..297 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 307..312 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 320..323 | CDD:409353 | 0/2 (0%) | ||
| Ig | 330..418 | CDD:472250 | 26/95 (27%) | ||
| Ig strand B | 348..352 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 365..369 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 383..387 | CDD:409353 | 2/9 (22%) | ||
| Ig strand F | 397..402 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 411..414 | CDD:409353 | 1/2 (50%) | ||
| IgI_4_Dscam | 422..517 | CDD:409548 | 39/94 (41%) | ||
| Ig strand A | 422..425 | CDD:409548 | 1/2 (50%) | ||
| Ig strand A' | 431..435 | CDD:409548 | 1/3 (33%) | ||
| Ig strand B | 438..447 | CDD:409548 | 4/8 (50%) | ||
| Ig strand C | 452..458 | CDD:409548 | 2/5 (40%) | ||
| Ig strand C' | 460..463 | CDD:409548 | 0/2 (0%) | ||
| Ig strand D | 468..476 | CDD:409548 | 2/7 (29%) | ||
| Ig strand E | 480..489 | CDD:409548 | 4/8 (50%) | ||
| Ig strand F | 496..504 | CDD:409548 | 4/7 (57%) | ||
| Ig strand G | 507..517 | CDD:409548 | 4/9 (44%) | ||
| IgI_5_Dscam | 521..608 | CDD:409550 | 30/87 (34%) | ||
| Ig strand A | 521..523 | CDD:409550 | 0/1 (0%) | ||
| Ig strand A' | 528..532 | CDD:409550 | 1/3 (33%) | ||
| Ig strand B | 535..542 | CDD:409550 | 0/6 (0%) | ||
| Ig strand C | 549..555 | CDD:409550 | 2/5 (40%) | ||
| Ig strand C' | 556..558 | CDD:409550 | 0/1 (0%) | ||
| Ig strand D | 565..569 | CDD:409550 | 2/4 (50%) | ||
| Ig strand E | 572..578 | CDD:409550 | 2/5 (40%) | ||
| Ig strand F | 586..594 | CDD:409550 | 4/7 (57%) | ||
| Ig strand G | 598..608 | CDD:409550 | 3/9 (33%) | ||
| Ig | 611..704 | CDD:472250 | 40/92 (43%) | ||
| Ig strand B | 630..634 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 644..648 | CDD:409353 | 2/3 (67%) | ||
| Ig strand E | 670..674 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 684..689 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 697..700 | CDD:409353 | 1/2 (50%) | ||
| IgI_7_Dscam | 707..802 | CDD:409546 | 33/94 (35%) | ||
| Ig strand A | 707..711 | CDD:409546 | 2/3 (67%) | ||
| Ig strand A' | 716..720 | CDD:409546 | 1/3 (33%) | ||
| Ig strand B | 723..732 | CDD:409546 | 2/8 (25%) | ||
| Ig strand C | 738..744 | CDD:409546 | 4/5 (80%) | ||
| Ig strand C' | 750..753 | CDD:409546 | 0/2 (0%) | ||
| Ig strand D | 761..764 | CDD:409546 | 0/2 (0%) | ||
| Ig strand E | 767..773 | CDD:409546 | 4/5 (80%) | ||
| Ig strand F | 780..788 | CDD:409546 | 4/7 (57%) | ||
| Ig strand G | 793..802 | CDD:409546 | 2/8 (25%) | ||
| Ig | 806..892 | CDD:472250 | 23/86 (27%) | ||
| Ig strand B | 823..827 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 836..840 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 868..872 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 882..887 | CDD:409353 | 1/4 (25%) | ||
| FN3 | <904..1195 | CDD:442628 | 103/295 (35%) | ||
| FN3 | 906..1006 | CDD:238020 | 27/102 (26%) | ||
| fn3 | 1221..1306 | CDD:394996 | 27/89 (30%) | ||
| Ig | 1336..1396 | CDD:409353 | 19/68 (28%) | ||
| Ig strand B | 1336..1340 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 1371..1375 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 1385..1390 | CDD:409353 | 3/4 (75%) | ||
| FN3 | <1407..>1606 | CDD:442628 | 68/200 (34%) | ||
| fn3 | 1408..1491 | CDD:394996 | 32/83 (39%) | ||
| Dscam | XP_038943864.1 | Ig | 26..121 | CDD:472250 | 33/94 (35%) |
| Ig strand B | 42..46 | CDD:409547 | 0/3 (0%) | ||
| Ig strand C | 55..59 | CDD:409547 | 1/3 (33%) | ||
| Ig strand E | 79..83 | CDD:409547 | 3/3 (100%) | ||
| Ig strand F | 99..104 | CDD:409547 | 2/4 (50%) | ||
| Ig strand G | 112..116 | CDD:409547 | 1/3 (33%) | ||
| Ig | 125..210 | CDD:472250 | 29/89 (33%) | ||
| Ig strand B | 141..145 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 157..161 | CDD:409353 | 3/3 (100%) | ||
| Ig strand E | 179..183 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 192..199 | CDD:409353 | 2/6 (33%) | ||
| Ig | 235..310 | CDD:472250 | 27/79 (34%) | ||
| Ig strand B | 242..246 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 255..259 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 290..295 | CDD:409353 | 2/4 (50%) | ||
| Ig | 313..395 | CDD:472250 | 24/88 (27%) | ||
| Ig strand B | 331..335 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 344..348 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 368..372 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 382..387 | CDD:409353 | 3/4 (75%) | ||
| Ig | 406..501 | CDD:472250 | 39/94 (41%) | ||
| Ig strand B | 424..428 | CDD:409353 | 3/3 (100%) | ||
| Ig strand C | 437..441 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 467..471 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 481..486 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 494..497 | CDD:409353 | 0/2 (0%) | ||
| Ig | 504..593 | CDD:472250 | 30/88 (34%) | ||
| Ig strand B | 521..525 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 534..538 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 557..561 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 572..577 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 586..589 | CDD:409353 | 0/2 (0%) | ||
| Ig | 596..686 | CDD:472250 | 40/92 (43%) | ||
| Ig strand B | 613..617 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 627..631 | CDD:409353 | 2/3 (67%) | ||
| Ig strand E | 652..656 | CDD:409353 | 2/3 (67%) | ||
| Ig strand F | 666..671 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 679..682 | CDD:409353 | 1/2 (50%) | ||
| Ig_DSCAM | 689..784 | CDD:409397 | 33/94 (35%) | ||
| putative Ig strand A | 689..693 | CDD:409397 | 2/3 (67%) | ||
| putative Ig strand A' | 698..702 | CDD:409397 | 1/3 (33%) | ||
| putative Ig strand B | 704..714 | CDD:409397 | 2/9 (22%) | ||
| putative Ig strand C | 720..726 | CDD:409397 | 4/5 (80%) | ||
| putative Ig strand C' | 733..736 | CDD:409397 | 0/2 (0%) | ||
| putative Ig strand D | 744..747 | CDD:409397 | 0/2 (0%) | ||
| putative Ig strand E | 749..755 | CDD:409397 | 4/5 (80%) | ||
| putative Ig strand F | 762..770 | CDD:409397 | 4/7 (57%) | ||
| putative Ig strand G | 775..784 | CDD:409397 | 2/8 (25%) | ||
| Ig_DSCAM | 785..884 | CDD:409398 | 29/101 (29%) | ||
| putative Ig strand A | 785..788 | CDD:409398 | 0/2 (0%) | ||
| putative Ig strand A' | 796..800 | CDD:409398 | 0/3 (0%) | ||
| putative Ig strand B | 803..810 | CDD:409398 | 0/6 (0%) | ||
| putative Ig strand C | 818..824 | CDD:409398 | 1/5 (20%) | ||
| putative Ig strand C' | 833..836 | CDD:409398 | 0/2 (0%) | ||
| putative Ig strand D | 842..846 | CDD:409398 | 0/3 (0%) | ||
| putative Ig strand E | 848..854 | CDD:409398 | 3/5 (60%) | ||
| putative Ig strand F | 861..869 | CDD:409398 | 3/7 (43%) | ||
| putative Ig strand G | 872..882 | CDD:409398 | 4/9 (44%) | ||
| FN3 | 885..978 | CDD:238020 | 28/102 (27%) | ||
| FN3 | <937..1300 | CDD:442628 | 141/375 (38%) | ||
| Ig_3 | 1287..1363 | CDD:464046 | 25/80 (31%) | ||
| FN3 | 1380..1470 | CDD:238020 | 33/89 (37%) | ||
| FN3 | 1486..1555 | CDD:238020 | 20/72 (28%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | ||
| Domainoid | 1 | 1.000 | - | - | ||
| eggNOG | 1 | 0.900 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||