Sequence 1: | NP_001261500.1 | Gene: | Dscam2 / 38788 | FlyBaseID: | FBgn0265296 | Length: | 2101 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943864.1 | Gene: | Dscam / 171119 | RGDID: | 619992 | Length: | 2034 | Species: | Rattus norvegicus |
Alignment Length: | 2161 | Identity: | 663/2161 - (30%) |
---|---|---|---|
Similarity: | 1032/2161 - (47%) | Gaps: | 227/2161 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MWISSRFFVILLLLNLDNTCSEPFEAHLRGPGFVMEPPGRVEFSNSSGGWLDCSASGSPQPTVDW 65
Fly 66 VHADGSAVTEIHGVRRVLRNGTLVLMPFAAAAYHQDVHNTIYRCIASNSVGRIVSRDVQVRAVVA 130
Fly 131 QAYKVDVEVLSAARGCTAILRCVVPTFVKELVRVVSWVHEPAIYIYPSLQGDGKFHLLPTGELLI 195
Fly 196 HNLQESDESQSFRCRSMHRLTRQVVVSSPTRLRI----NSHRGIISPSVVEHTAHVQVSQDEGAV 256
Fly 257 LLCVAQGCPSPEYSWFTHNGAGPLPV-LSGPRVRLLGPILAIEAVTGEDSGVYKCTAGNVGGEAS 320
Fly 321 AELRLTVATPIQVEISPNVLSVHMGGTAEFRCLVTSNGSPVGMQNILWYKDGRQLPSSGRVEDT- 384
Fly 385 -----LVVPRVSRENRGMYQCVVRRPEGDTFQATAELQ--LGDAPPVLLYSFIEQTLQPGPAVSL 442
Fly 443 KCSAAGNPTPQISWTLDGFPLPSNGRFMIGQYITVHGDVISHVNISHVMVEDGGEYACIAENRAG 507
Fly 508 RVQHAARLNIYGLPYIRLIPKVTAVSGETLNLKCPVAGYPIEEIHWERGGRELPDDIRQ-RVQPD 571
Fly 572 GSLTISPVQKNSDSGVYTCWARNKQGHSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASLTCSV 636
Fly 637 VKGDLPLTINWRKDGRPIDPTQHMSVKQVDQYNSILVIENLGSDHTGNYSCVVRNSAAEVENSQA 701
Fly 702 LLVNVPPRWIVEPVDANVERNRHIMLHCQAQGVPTPSIVWKKATGSKSGEYEEVRERPFTKLLGN 766
Fly 767 GSLLLQHVKEDREGFYLCQANNGIGTGIGKVIQLKVNSSPYFSSTSRSVMVKKGDTALLQCAVSG 831
Fly 832 DKPINIVWMRSGKNTLNPS-TNYKISVKQEATPDGVSAELQIRTVDATDSGPYFCRASNLYGNDQ 895
Fly 896 QLVQLQVQEPPLPPSVLEAAMISSRSVNIKWQPKTLGTGDVTKYIVEFREADHSLPPALFVDQWQ 960
Fly 961 QIE-VKD-PPHFN-AMIENLKPATRYAFRVIAEGSAGRSAPSQELIVRTEPQRPAGPPLSLSARP 1022
Fly 1023 LSSTELLISWVAPLPELRHGDIQGYNVGYK-LSSSGNTAYNFTSVSGDGDGGNGELLLSGLAKFA 1086
Fly 1087 RYTVVVQAFNQVGPGPLSEPTAAQTMEDVPSRPPEDVRCAALSSQSLQVSWQPPPIYHTNGLLQG 1151
Fly 1152 YKLIF-EPIIDDIQPSKDEVESRKTTALTMVLTGLRKYTNYSIQVLAHTRMGDGVVSKPLFCHSE 1215
Fly 1216 EDVPEAPADIKVVSSSSQSLYISWLPPNEPNGVITKYSL-----YTRVVNGREELNNEKRSLPSQ 1275
Fly 1276 QAYYEAKGLHPHMEYQFWVTASTRVGEGKSSRVSSQITTNRIPARIISFGGPVVRPWRSTVTLPC 1340
Fly 1341 TAVGKPKR--EWFKSDVALRQGGLHNSQLLD-------SGDLIISSLQLADGGNYSCQVDNGIGT 1396
Fly 1397 DRLTHTLIVQVPPTAPVLYVTSATSSSILMHWKCGFTGNAPITGYTLFYRRANGNT-DEMQLSRH 1460
Fly 1461 ASSHELKGLMCGSTYQIHLSAQNKVGTSPTSTILHVRTQGQSPGHPASTALLAP-NSTSLLVRLH 1524
Fly 1525 SWPDNGCPLLYFVLQYRAVTDDPDAEWVLVSNALKPQRRIVINNLQPSTLYQLRMEAHNVAGISQ 1589
Fly 1590 AEFNFVTLTKDGDPPPPEIMHRGRSGQTTVIFANINLLIPTIAAVSGMFCTIIMIIVCYRH---- 1650
Fly 1651 ---MLKNAPPLAEQSQIQKESLENRANSEAAQRERYYATIHKVSMQNNDKIPETSEDISPYATFQ 1712
Fly 1713 LSEAG-GNMSQPHHGGPANTLLHSFMYHERALAEG----CSSPPPAASKNRRRHSRKTEPESEES 1772
Fly 1773 ESDQ------------------------------DQLTSSRTESSNQHEGKIKHSIIYHGAQSST 1807
Fly 1808 SSDLSPMSEQKSLPRRGRSRYHHQQYQFSTNTTPRHHNSNKMNNNTTSNTNT-TATNTTATPSTS 1871
Fly 1872 SNSNKILSPRGGNLKSISSTFKSQDS---IQCHIPTLVKSPSISTQQQKQFHKQQLQNSSTNNSQ 1933
Fly 1934 HSSSNPNSSSLKQQQPLLITPKLHQLEANGQELLGLDGIGNSPLV----ACMPPSSQFRPIPHKS 1994
Fly 1995 IMPAHEP-PHHHNHSQQSHPHQQQQQQQHPGTLLNPSTAMLSSKFFTAPTLPKXDTAN-GGSEYV 2057
Fly 2058 GGAMEA-MDGFGYDSG 2072 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam2 | NP_001261500.1 | Ig | 51..127 | CDD:299845 | 27/75 (36%) |
Ig | 138..>203 | CDD:299845 | 20/64 (31%) | ||
I-set | 238..327 | CDD:254352 | 30/89 (34%) | ||
Ig | 247..327 | CDD:299845 | 27/80 (34%) | ||
I-set | 332..418 | CDD:254352 | 25/93 (27%) | ||
IGc2 | 344..407 | CDD:197706 | 19/68 (28%) | ||
IG_like | 432..517 | CDD:214653 | 36/84 (43%) | ||
IGc2 | 436..507 | CDD:197706 | 31/70 (44%) | ||
I-set | 521..610 | CDD:254352 | 32/89 (36%) | ||
IGc2 | 533..597 | CDD:197706 | 23/64 (36%) | ||
Ig | 630..699 | CDD:143165 | 33/68 (49%) | ||
IG_like | 714..802 | CDD:214653 | 30/87 (34%) | ||
Ig | 725..802 | CDD:299845 | 28/76 (37%) | ||
Ig | 823..894 | CDD:143165 | 23/71 (32%) | ||
FN3 | 906..1006 | CDD:238020 | 27/102 (26%) | ||
FN3 | 1013..1111 | CDD:238020 | 37/98 (38%) | ||
FN3 | 1119..1209 | CDD:238020 | 41/90 (46%) | ||
FN3 | 1219..1313 | CDD:238020 | 30/98 (31%) | ||
Ig | 1336..1402 | CDD:143165 | 21/74 (28%) | ||
FN3 | 1409..1498 | CDD:238020 | 33/89 (37%) | ||
FN3 | 1515..1588 | CDD:238020 | 22/72 (31%) | ||
Dscam | XP_038943864.1 | Ig | 26..121 | CDD:416386 | 33/94 (35%) |
Ig strand A' | 33..37 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 40..49 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 55..61 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 63..66 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 72..75 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 80..85 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 98..106 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 109..121 | CDD:409353 | 5/11 (45%) | ||
Ig | 125..210 | CDD:416386 | 29/89 (33%) | ||
Ig strand A | 126..130 | CDD:409353 | 2/3 (67%) | ||
Ig strand A' | 132..136 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 139..149 | CDD:409353 | 2/9 (22%) | ||
Ig strand C | 157..163 | CDD:409353 | 4/5 (80%) | ||
Ig strand C' | 164..167 | CDD:409353 | 0/7 (0%) | ||
Ig strand E | 179..185 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 191..201 | CDD:409353 | 2/9 (22%) | ||
IGc2 | 239..300 | CDD:197706 | 23/65 (35%) | ||
Ig strand B | 242..246 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 255..259 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 290..295 | CDD:409353 | 2/4 (50%) | ||
Ig | 313..395 | CDD:416386 | 24/88 (27%) | ||
Ig strand A | 314..319 | CDD:409353 | 0/4 (0%) | ||
Ig strand A' | 322..326 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 329..339 | CDD:409353 | 2/9 (22%) | ||
Ig strand C | 344..350 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 351..354 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 368..374 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 381..389 | CDD:409353 | 5/7 (71%) | ||
Ig | 406..501 | CDD:416386 | 39/94 (41%) | ||
Ig strand A | 406..409 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 415..419 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 422..431 | CDD:409353 | 4/8 (50%) | ||
Ig strand C | 436..442 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 444..447 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 452..460 | CDD:409353 | 2/7 (29%) | ||
Ig strand E | 464..473 | CDD:409353 | 4/8 (50%) | ||
Ig strand F | 480..488 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 491..501 | CDD:409353 | 4/9 (44%) | ||
Ig | 504..593 | CDD:416386 | 30/88 (34%) | ||
Ig strand A | 505..507 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 512..516 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 519..526 | CDD:409353 | 0/6 (0%) | ||
Ig strand C | 533..539 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 540..542 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 549..553 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 557..563 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 571..579 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 583..593 | CDD:409353 | 3/9 (33%) | ||
Ig | 596..686 | CDD:416386 | 40/92 (43%) | ||
Ig strand A | 597..599 | CDD:409353 | 1/1 (100%) | ||
Ig strand B | 611..620 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 625..632 | CDD:409353 | 4/6 (67%) | ||
Ig strand C' | 634..636 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 643..648 | CDD:409353 | 0/4 (0%) | ||
Ig strand E | 651..658 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 665..673 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 676..685 | CDD:409353 | 3/8 (38%) | ||
Ig_DSCAM | 689..784 | CDD:409397 | 33/94 (35%) | ||
Ig strand B | 707..711 | CDD:409397 | 1/3 (33%) | ||
Ig strand C | 720..724 | CDD:409397 | 2/3 (67%) | ||
Ig strand E | 749..753 | CDD:409397 | 3/3 (100%) | ||
Ig strand F | 763..768 | CDD:409397 | 3/4 (75%) | ||
Ig strand G | 777..780 | CDD:409397 | 1/2 (50%) | ||
Ig_DSCAM | 785..884 | CDD:409398 | 29/101 (29%) | ||
Ig strand B | 805..809 | CDD:409398 | 0/3 (0%) | ||
Ig strand C | 818..822 | CDD:409398 | 0/3 (0%) | ||
Ig strand E | 848..852 | CDD:409398 | 1/3 (33%) | ||
Ig strand F | 862..867 | CDD:409398 | 1/4 (25%) | ||
Ig strand G | 875..878 | CDD:409398 | 0/2 (0%) | ||
FN3 | 885..978 | CDD:238020 | 28/102 (27%) | ||
FN3 | 986..1083 | CDD:238020 | 37/98 (38%) | ||
FN3 | 1091..1184 | CDD:238020 | 42/95 (44%) | ||
FN3 | 1189..1278 | CDD:238020 | 30/96 (31%) | ||
Ig_3 | 1287..1363 | CDD:404760 | 25/80 (31%) | ||
Ig strand B | 1303..1307 | CDD:409353 | 1/3 (33%) | ||
Ig strand C | 1316..1320 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 1342..1346 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 1356..1361 | CDD:409353 | 3/4 (75%) | ||
FN3 | 1380..1470 | CDD:238020 | 33/89 (37%) | ||
FN3 | 1486..1555 | CDD:238020 | 20/72 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4784 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 968 | 1.000 | Inparanoid score | I306 |
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9015 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1391 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.840 |