DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG8641 and RABA1f

Sequence 1:NP_001261494.1 Gene:CG8641 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_200894.1 Gene:RABA1f AraportID:AT5G60860 Length:217 Species:Arabidopsis thaliana

Alignment Length:226 Identity:50/227 (22%)
Similarity:102/227 (45%) Gaps:36/227 (16%)


  Fly   167 YRLVMLGSSRAGKSSIVARFLGNRFEEAYTPTI-EEFHRKLYRIRNEVFQLDILDTSGYHPFPAM 230
            :::|::|.|..|||::::||..|.|......|| .||..:...:.:::.:..|.||:|...:.|:
plant    14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAI 78

  Fly   231 RRLSFLTGDLFILVFSMDSRESFEEVVR-LRENILETKWAALNPGSGFKKKSLPKIPMILAGNKC 294
            ....:......:||:.:....:||.|.| |:|               .:..:...|.::..|||.
plant    79 TSAYYRGAVGALLVYDVTRHVTFENVERWLKE---------------LRDHTDANIVIMFVGNKA 128

  Fly   295 D-RDFKTVQVDEVMGYIAGQDNCCTFVECSARQNYRIDDLFHSLFT-----VSNLPLEMTPNHHR 353
            | |..:.|..::...: |.::| ..|:|.||.::..:::.|..:.:     ||           |
plant   129 DLRHLRAVSTEDAKAF-AEREN-TFFMETSALESMNVENAFTEVLSQIYRVVS-----------R 180

  Fly   354 RLVSVFGAPSPLPPHGSAVGGTKKNALSIKR 384
            :.:.:...|:.||...:...|:|.:..::|:
plant   181 KALDIGDDPAALPKGQTINVGSKDDVSAVKK 211

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8641NP_001261494.1 Rhes_like 167..434 CDD:133343 50/227 (22%)
RAS 167..338 CDD:214541 41/174 (24%)
RABA1fNP_200894.1 PLN03110 3..217 CDD:178657 50/227 (22%)
Rab11_like 11..175 CDD:206660 41/178 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.750 Consistency score
10.910

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