DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8641 and Rgk3

DIOPT Version :10

Sequence 1:NP_648073.1 Gene:CG8641 / 38771 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster


Alignment Length:511 Identity:96/511 - (18%)
Similarity:155/511 - (30%) Gaps:203/511 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IH--PSAATTTTPNS--------RNFSASNNNNVRSNSSKSNQQTAAHRGATTHPTQIPHTHHPS 82
            ||  |.|:.:.||..        |..:.|.:..:.|.:....|:|.|.:    ...|..||...:
  Fly    32 IHGMPGASGSATPEGGTPGYRRRRPATRSQSARITSGARSVRQKTKAQQ----QQQQQQHTLQET 92

  Fly    83 TTHSTDE------ASPPQAHVVT--------------FLDESTAGGSNGAVTSSRLVTTAELHQA 127
            .::.|.|      .:|||...::              |||                |.|..:|..
  Fly    93 RSYCTSEPRLSETETPPQRRKLSQRRPQTHAHRKSNAFLD----------------VPTMNMHHL 141

  Fly   128 HMLEHHSNLD-----------AIEQADDF---------------------------IYGPGAGLS 154
            .:.:...::|           .|.:.|.|                           :.|.|:.|.
  Fly   142 RVNDDDEDVDRLRTFSASKGGIINRGDSFRRRRSRSNSLAPSSPMHTRNGVGGLGGVAGGGSSLG 206

  Fly   155 L-CDDSLPSAKN---------------CYRLVMLGSSRAGKSSIVARFLGNRFEEAYT-PTIEEF 202
            | |..:..|:.|               .||:.||||:..||.:::::|..:....||. |..::.
  Fly   207 LGCGYNGGSSSNGFGNANAQENHQPVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDA 271

  Fly   203 HRKLYRIRNEVFQLDILDTSGYHPFPAMRRLSFLTG-----------DLFILVFSMDSRESFEEV 256
            .:.:..|.|                .....|.||||           |.|::|:|...:|||...
  Fly   272 EQNVSIILN----------------GTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRA 320

  Fly   257 VRLRENILETKWAALNPGSGFKKKSLPKIPMILAGNKCDRDFKTVQVDEVMGYIAGQDNCCT--- 318
            .::...:.:             ...|...|.||..||.|......        ::.||..|.   
  Fly   321 KQILSRLQD-------------MDLLRHRPTILVANKIDLARSRA--------VSAQDGKCVACT 364

  Fly   319 ----FVECSARQNYRIDDLFHSLFTVSNL-----PLEMTPNHHRRLVSVFGAPSPLPPHGSAVGG 374
                |:|.|...|:..|:|.....|...|     .|::.|                         
  Fly   365 FGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNP------------------------- 404

  Fly   375 TKKNALSIKRRFSDACGVVTPNARRPSIRTDLNLMRSKTMALNEG--EGVRSPSRW 428
             ||:....|.:|.:       |....::.||..|...|.   ::|  ....||:.|
  Fly   405 -KKSKDKDKNKFKE-------NTNIETVETDNCLTDLKA---DDGGPRDANSPAHW 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8641NP_648073.1 Rhes_like 167..434 CDD:133343 59/288 (20%)
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 44/197 (22%)

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