DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG8641 and Rap2l

Sequence 1:NP_001261494.1 Gene:CG8641 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_477402.1 Gene:Rap2l FlyBaseID:FBgn0283666 Length:182 Species:Drosophila melanogaster

Alignment Length:180 Identity:55/181 (30%)
Similarity:94/181 (52%) Gaps:14/181 (8%)


  Fly   167 YRLVMLGSSRAGKSSIVARFLGNRFEEAYTPTIEEFHRKLYRIRNEVFQLDILDTSGYHPFPAMR 231
            :::|:|||...|||::..:|:...|.|.|.||||:|:||...:.:....|:||||:|...|.:||
  Fly     4 FKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFASMR 68

  Fly   232 RLSFLTGDLFILVFSMDSRESFEEVVRLRENILETKWAALNPGSGFKKKSLPKIPMILAGNKCDR 296
            .|....|..||:::|:.:.::|:::..::..|...|      ||       ...|::|..||.|.
  Fly    69 DLYIKNGHGFIVMYSLTNHQTFQDISSMKNVITRVK------GS-------QPAPILLVANKFDL 120

  Fly   297 DFKTVQVDEVMGYIAGQDNCCTFVECSARQNYRIDDLFHSLFTVSNLPLE 346
            |.:. :|....|....|...|.|:|.||:....::::|.::....||..|
  Fly   121 DCQR-EVSTAEGNALAQLWDCPFIEASAKDRINVNEVFATIVREMNLTQE 169

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG8641NP_001261494.1 Rhes_like 167..434 CDD:133343 55/181 (30%)
RAS 167..338 CDD:214541 52/171 (30%)
Rap2lNP_477402.1 Rap2 16..165 CDD:133376 47/163 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C120122152
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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