DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uqcc1 and uqcc1

DIOPT Version :10

Sequence 1:NP_648064.1 Gene:Uqcc1 / 38758 FlyBaseID:FBgn0035722 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_989308.1 Gene:uqcc1 / 394930 XenbaseID:XB-GENE-1017093 Length:300 Species:Xenopus tropicalis


Alignment Length:250 Identity:84/250 - (33%)
Similarity:137/250 - (54%) Gaps:28/250 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAGGLARTAWATQHTYKHRPAILGLLEQPCRLCSSTGVVDNTNKTKPGTAEAAEGGI--LKRVLN 72
            |:|.:.||           ||:...:.:|..       |.:||:|.....:.:|..:  ..:::.
 Frog    53 LSGPVHRT-----------PAVASQIWRPLH-------VTHTNQTTKDKLQPSEEEVSTFTKIIE 99

  Fly    73 KVGFT---PNTKARLKVTSHLLYESVADKINYVTFFRDFNLPNTFNSWFLVTELHVWLLLMRSMA 134
            .:|||   ...|.::|:.:..:|....::|:|..||...:||:|.|||||||:||||:.|:|...
 Frog   100 AMGFTGPLKYNKWKIKIAALRMYTCCVERIDYDEFFEKCSLPDTLNSWFLVTQLHVWMCLVRMKQ 164

  Fly   135 EGSETGEDGRFLRNCIVEAMWGDVNTRAKKLGAHNPSRTRQQIETLSEQFQAALIAYDEGIMSDD 199
            |    |..|:::...:|.:||.||..|.|.:|..:.: .:..:.:::|.|.||:..|||||:|||
 Frog   165 E----GRAGKYMCRYVVHSMWEDVEQRGKVMGIDSVT-LKNSMRSMTEIFYAAIFGYDEGIISDD 224

  Fly   200 RVLACALWRRFFEMNCDDYAQIERLVKYVRQQASMLDSLPRDQFIVKPKVAWLEL 254
            |:||.||||..|...|||..::|.:|:|||:|...||:|..:..::..:|.|..|
 Frog   225 RILAAALWRNLFNKQCDDPRKLELIVEYVRKQVQFLDTLDGEDLLLTGEVVWRPL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uqcc1NP_648064.1 Ubiq_cyt_C_chap 107..245 CDD:461119 59/137 (43%)
uqcc1NP_989308.1 Ubiq_cyt_C_chap 137..272 CDD:461119 59/139 (42%)

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