DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9948 and CG6276

DIOPT Version :10

Sequence 1:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster


Alignment Length:124 Identity:21/124 - (16%)
Similarity:43/124 - (34%) Gaps:33/124 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TLINFSLPKLWGTQRLLRCGKGDDSDGDGGEGSSSGGDQRIRRRSSNFESDHQ--NRRLKVESSE 74
            ||.:|..|   |.:.:|:                    .:..:||...:|.|.  :..:.:.:.:
  Fly   106 TLASFLQP---GLEEILQ--------------------YQAEKRSGCIKSTHSPTSEEMYIAAVK 147

  Fly    75 KEGIEEFREKIMLDLRNVADKMKESIFRQQVLLGEEEEDKEIEIERDDSPPEATGAATV 133
            .....:.:.|....||....:..:....:|:::..|:...|.|        |...|:||
  Fly   148 DNPYPQIKSKKQKALRGRFPRASQKSVLEQIMVDAEKNASERE--------EMVRASTV 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_648063.1 MADF 14..95 CDD:214738 11/82 (13%)
CG6276NP_650445.3 MADF 32..116 CDD:214738 5/12 (42%)
BESS 431..465 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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