DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9948 and LOC110439798

DIOPT Version :10

Sequence 1:NP_648063.1 Gene:CG9948 / 38757 FlyBaseID:FBgn0035721 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_021332043.1 Gene:LOC110439798 / 110439798 -ID:- Length:250 Species:Danio rerio


Alignment Length:187 Identity:51/187 - (27%)
Similarity:79/187 - (42%) Gaps:46/187 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KLIDLVEPNPVLYKRSGLSNYDAMKAKTDIWARIAEMMGCDVDFCLMRWNNLHYQFRKEFR---- 74
            |||..|...||||..| |.:|.:.:.:...|..:|..:|..|..|..||..:..::.:|.|    
Zfish     8 KLIQTVYAFPVLYNVS-LHDYRSTERRVKAWREVAASVGLSVVECKRRWKTIRDRYIRERRLCKL 71

  Fly    75 RADTSGST---WPYLERLRFL-AEIQP---PSKVKTKPKTNKQEATIQTETPVQFLWDTFEDGDV 132
            :.|..|..   ||:.|.|.|| |.|:.   ||..: .|:..:||                     
Zfish    72 KKDLGGRRLHYWPHRESLAFLDAHIRKRRRPSGAQ-GPEEEQQE--------------------- 114

  Fly   133 PQQSSTFIIEEVIEEPSEQIIQEEIIYEEQEPAEIISPRSSFLQMDQILAQLKE-PQ 188
             :.||.     .::|..|:.:|||.:   .:.:..:||.:. |.: .|:.|||. ||
Zfish   115 -EHSSA-----ALQEDKEECVQEECV---SDSSRFVSPLNP-LPL-SIVTQLKPVPQ 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9948NP_648063.1 MADF 14..95 CDD:214738 29/88 (33%)
LOC110439798XP_021332043.1 MADF 8..97 CDD:214738 29/89 (33%)
BESS 210..244 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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