Protein Alignment Sbds and SDO1

DIOPT Version :10

• Sequence 1: NP_648057.2
• Gene: Sbds / 38749
• FlyBaseID: FBgn0035714
• Length: 252
• Species: Drosophila melanogaster
• Sequence 2: NP_013122.1
• Gene: SDO1 / 850709
• SGDID: S000004012
• Length: 250
• Species: Saccharomyces cerevisiae
• Alignment Length: 242
• Identity: 106/242 - (43%)
• Similarity: 155/242 - (64%)
• Gaps: 12/242 - (4%)

  Fly     7 PTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQAAKKDE 71
            |:.||:||||::|||||..||||:|||:|||..:|...|||:|||||.|.||.|||||..|.|::
Yeast     6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLVANKED 70

  Fly    72 LQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEK 136
            |||.|..|:..::.:||:.|||:|:||||||..|:...|.::..|:|.|:||.:::.||.::|.|
Yeast    71 LQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHK 135

  Fly   137 SLKDAHFSVKMNRNTKQNTLEAIKIL--KDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAV 199
            :|::..||..:|:..|...|||||:|  |..:||.|::||::|:.:......:|.|.:.||..:.
Yeast   136 ALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQPELIEKISKLIASS 200

  Fly   200 EHE----EWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLEL 242
            ..|    |.|..|  .|.||||..||.:..|...    ||.:::|::
Yeast   201 PGESTKPELDPWT--CTGLIDPVNYRDLMTLCDK----KGTVQVLDM 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sbds	NP_648057.2	PTZ00448	4..>226	CDD:185627	102/224 (46%)
SDO1	NP_013122.1	RNA_SBDS	9..244	CDD:129392	105/239 (44%)