DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbds and sbds

DIOPT Version :10

Sequence 1:NP_648057.2 Gene:Sbds / 38749 FlyBaseID:FBgn0035714 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_957415.2 Gene:sbds / 394096 ZFINID:ZDB-GENE-040426-1116 Length:250 Species:Danio rerio


Alignment Length:247 Identity:155/247 - (62%)
Similarity:192/247 - (77%) Gaps:2/247 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQAAK 68
            ||||||||||||||:||:||||||||||||||||:||||.:|||:||||||:|||.||||||.||
Zfish     3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTNTVFVNVSKGQVAK 67

  Fly    69 KDELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASI 133
            |::|..||...|.|||||:||||||||||:|||||.|:.....|...||..||||||:|||..::
Zfish    68 KEDLSNAFGTDDLTEICKQILSKGELQVSDKERQSQLEQMFRDIATIVAEKCVNPETKRPYTVNL 132

  Fly   134 IEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANA 198
            ||:::||.|||||.|::|||..||.||.||:.:.|:|:.|:||.....|: |.:|||.:..|..|
Zfish   133 IERAMKDIHFSVKANKSTKQQALEVIKQLKESIQIQRAHMRLRFVLPAKD-GKRLKEKLKPLIKA 196

  Fly   199 VEHEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKEVVESEE 250
            ||:|::|: .|.:..|||||.:|.||||:|.||||||.||:|.||:|.|.:|
Zfish   197 VENEDFDD-QLEMVCLIDPGCFRDIDELIRCETKGKGTLEVLSLKDVEEGDE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbdsNP_648057.2 PTZ00448 4..>226 CDD:185627 138/221 (62%)
sbdsNP_957415.2 PTZ00448 1..>223 CDD:185627 138/221 (62%)

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