DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbds and sdo1

DIOPT Version :10

Sequence 1:NP_648057.2 Gene:Sbds / 38749 FlyBaseID:FBgn0035714 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_593869.1 Gene:sdo1 / 2543459 PomBaseID:SPAC4F8.03 Length:246 Species:Schizosaccharomyces pombe


Alignment Length:243 Identity:122/243 - (50%)
Similarity:167/243 - (68%) Gaps:4/243 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKGQAAK 68
            |..|..|||||||::|:.||||||||:|||||||..||:..|.|:|||||.|.||.|||||..|.
pombe     3 ISQPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGHVAS 67

  Fly    69 KDELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASI 133
            :.:|:|||...|..:|..|||.||:.||.||||...:.:....||:.|.|:|::|.::|||||||
pombe    68 RQDLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNSKRPYPASI 132

  Fly   134 IEKSLKDAHFSVKMNRNTKQNTLEAIKIL--KDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLA 196
            |||:|.|..|||..::..|...|||||.|  |:.:||.|:||::|:....|:|.. |:|.:..||
pombe   133 IEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQGKA-LRERLRSLA 196

  Fly   197 NAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKE 244
            :.:|.|..|:....:.|:| ||.|::||||||||||.:|::::|::.|
pombe   197 DEIEEENIDDEYECIALVI-PGNYKLIDELVRNETKNRGMVQVLDMSE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbdsNP_648057.2 PTZ00448 4..>226 CDD:185627 111/223 (50%)
sdo1NP_593869.1 PTZ00448 1..>225 CDD:185627 111/223 (50%)

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