DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbds and sbds-1

DIOPT Version :10

Sequence 1:NP_648057.2 Gene:Sbds / 38749 FlyBaseID:FBgn0035714 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_497226.2 Gene:sbds-1 / 175218 WormBaseID:WBGene00021063 Length:253 Species:Caenorhabditis elegans


Alignment Length:253 Identity:146/253 - (57%)
Similarity:190/253 - (75%) Gaps:8/253 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSK-IFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTNVSKG 64
            ||| |.|||||..|||||:||:||.|||||||||||||::||:.|||||||||||||||:|||||
 Worm     1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFSNVSKG 65

  Fly    65 QAAKKDELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPY 129
            |.:||:||..||...|:.||||.||.||:|||||||||:..|..|..:...:|::.|||||:||.
 Worm    66 QLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPV 130

  Fly   130 PASIIEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGG---KLKES 191
            |.|:|:|:|::.|||:|.||::||..|:||..|::.:.|||::||:||:...||...   |||  
 Worm   131 PPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAIPTKEAKSVHTKLK-- 193

  Fly   192 VVKLANAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKEVVESE 249
              .|.:.||.::|.:.:|.:..||:||.:|.:|:||||||||.|.||:|.||:|||.|
 Worm   194 --TLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVVEGE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SbdsNP_648057.2 PTZ00448 4..>226 CDD:185627 125/224 (56%)
sbds-1NP_497226.2 PTZ00448 8..>226 CDD:185627 123/221 (56%)

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