DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ATM1

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_014030.1 Gene:ATM1 / 855347 SGDID:S000004916 Length:690 Species:Saccharomyces cerevisiae


Alignment Length:546 Identity:168/546 - (30%)
Similarity:281/546 - (51%) Gaps:63/546 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 GILLTIASVVMFISGIFSV---DVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMV 182
            |:.:....|..|.|.:|..   .||..||...:..:.::.|..:::.|:|||  .|:|  |..:.
Yeast   155 GLTILCYGVARFGSVLFGELRNAVFAKVAQNAIRTVSLQTFQHLMKLDLGWH--LSRQ--TGGLT 215

  Fly   183 DDVEKIRDGISEKVGHFVY--LVVGFIITVA---ISFSYGWKLTLAVSSYIPLVILLNYYVAKFQ 242
            ..:::...|||:.:...|:  :.:.|.|:|.   :::.:|     |..:.|....:|.|.:  |.
Yeast   216 RAMDRGTKGISQVLTAMVFHIIPISFEISVVCGILTYQFG-----ASFAAITFSTMLLYSI--FT 273

  Fly   243 GKLTA-----REQESYAG--AGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPAR----KASQW 296
            .|.||     |...:.|.  |.::|.:.|.:...|..|..||....:|...|:..|    |.|| 
Yeast   274 IKTTAWRTHFRRDANKADNKAASVALDSLINFEAVKYFNNEKYLADKYNGSLMNYRDSQIKVSQ- 337

  Fly   297 KGAF--SG---LSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGADN 356
            ..||  ||   :....|.:|:|:.|.|..  |.||.:.|..:.|:......:.:.|.|.:.  .:
Yeast   338 SLAFLNSGQNLIFTTALTAMMYMGCTGVI--GGNLTVGDLVLINQLVFQLSVPLNFLGSVY--RD 398

  Fly   357 IARTAPFLESFATARGCATNLFKV----IDLTSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSR 417
            :.::...:|:          |||:    :.:.:...||     :|...:..|:.|::|.|.|  .
Yeast   399 LKQSLIDMET----------LFKLRKNEVKIKNAERPL-----MLPENVPYDITFENVTFGY--H 446

  Fly   418 PEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN 482
            |:..:.:..:..|.||...|:|||||.||||.::|:.|||||..|.:|::..||::|:|..||..
Yeast   447 PDRKILKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKV 511

  Fly   483 IAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGG 547
            |.||.|:..||..||.:|:.:|:..||.:|:.....:|.....|..||:.:.:::||||..:|||
Yeast   512 IGVVPQDTPLFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGG 576

  Fly   548 QKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQAL--DLASKGRTTIVVSHRLSAIRGADK 610
            :|||:||||.|::|.:|:..||||||||..:|:.:.:.:  :..|..||::.::|||..|..|||
Yeast   577 EKQRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHRLRTIADADK 641

  Fly   611 IVFIHDGKVLEEGSHDDLMALEGAYY 636
            |:.:.:|:|.|||.|.:|:|:.|:.|
Yeast   642 IIVLDNGRVREEGKHLELLAMPGSLY 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 168/546 (31%)
MdlB 711..1299 CDD:440747
ATM1NP_014030.1 ATM1 81..674 CDD:444078 168/546 (31%)
Blue background indicates that the domain is not in the aligned region.

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