DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ABCB13

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_174115.1 Gene:ABCB13 / 839687 AraportID:AT1G27940 Length:1245 Species:Arabidopsis thaliana


Alignment Length:1314 Identity:473/1314 - (35%)
Similarity:698/1314 - (53%) Gaps:100/1314 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSEGKSQEEAPMAEGLE--PTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIYSEF 72
            ||.|..|.|....|..:  ..|.::.:.||..:...:...:..|.:..||...|||...:.:.:.
plant     7 SSNGNIQAETEAKEEKKNIKKESVSLMGLFSAADKLDYFLMLLGGLGACIHGATLPLFFVFFGKM 71

  Fly    73 TSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMFISGIF 137
            ...|          .|:...|     |.:  :||...| |||         |....:|.|:|...
plant    72 LDSL----------GNLSTDP-----KAI--SSRVSQN-ALY---------LVYLGLVNFVSAWI 109

  Fly   138 SVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDL-ASKQNFTQSMVDDVEKIRDGISEKVGHFVY 201
            .|..:.....||..|:||....|::.:||.:.|. |...|....:..|...::|.|.:|..|.:.
plant   110 GVSCWMQTGERQTARLRINYLKSILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTDHVLR 174

  Fly   202 LVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSS 266
            .:..||....|.|...|:|||.....:||:.:.....|.....::.:.:.:||.||.:|||::|.
plant   175 YLSQFIAGFVIGFLSVWQLTLLTLGVVPLIAIAGGGYAIVMSTISEKSETAYADAGKVAEEVMSQ 239

  Fly   267 IRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDR 331
            :|||.:|.||:..|:.|.|.|..|.|..:..|...||...:..|:|:.:.|...||...|:...:
plant   240 VRTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRHGK 304

  Fly   332 NVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVI-----DLTSKIDPLS 391
            ....|.:| .||.:.|.|..:|     :.||.|.:.|..|..|.|:|::|     :.:.::|   
plant   305 TNGAKAFT-TILNVIFSGFALG-----QAAPSLSAIAKGRVAAANIFRMIGNNNSESSQRLD--- 360

  Fly   392 TDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRF 456
             :|..|. .:.|.:|||.|.|.|||||. :|...|:..||:|:|.|.||.||.||||.:.::|||
plant   361 -EGTTLQ-NVAGRIEFQKVSFAYPSRPN-MVFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRF 422

  Fly   457 YDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAG 521
            |:|..|.:|||..||:...::|.|..:.:|.|||.||..|||.||..||..|...:|..||..|.
plant   423 YEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTIASNILLGKENANMDQIIEAAKAAN 487

  Fly   522 AHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQAL 586
            |..||.:||..|.:.:||.|:|||||||||||||||:::|||||||||||||||.:|||.|||||
plant   488 ADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQAL 552

  Fly   587 DLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDINMPDEVE 651
            |...:.||||||:||||.||..||||.:.||:|.|.|||.:||...|.|..:|...:.. |.|..
plant   553 DNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELMLRGGDYATLVNCQETE-PQENS 616

  Fly   652 KEDSIEDTKQK----SLALFEKSFETSPLNFEKGQKNSVQFEEPIIKALIKDTNAQSAEAPPEKP 712
            :....|..|.:    |......|..||  :|...|:              |..|..|.:.     
plant   617 RSIMSETCKSQAGSSSSRRVSSSRRTS--SFRVDQE--------------KTKNDDSKKD----- 660

  Fly   713 NFFRTFSRILQLAK---QEWCYLILGTISAVAVGFLYPAF----AVIFGEFYAALAEKDPEDALR 770
              |.:.|.|.:|.|   .||.|.:||:|.||..|...|.|    |.:...||:........| :.
plant   661 --FSSSSMIWELIKLNSPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPFPNVIKRD-VE 722

  Fly   771 RTAVLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALS 835
            :.|::   ..|...:|..:..||.|.:...|..||:|:|...|:|:::.|:||||.:.|:.|:|:
plant   723 KVAII---FAGAGIVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLT 784

  Fly   836 ARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMS 900
            :.|:.:|..::.|:...||.::|.||..::::::|.:|:|::|.:..|..|:::.:.:.|...:.
plant   785 SILAADATLVRSALADRLSTIVQNLSLTVTALALAFFYSWRVAAVVTACFPLLIAASLTEQLFLK 849

  Fly   901 NAVVREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQR--VEVLIRQKLRWRGVLNS 963
            .......:....|..:|.|:|.||||||....|..:..::|.|:.:  ....:|..:...|.  .
plant   850 GFGGDYTRAYSRATSVAREAIANIRTVAAYGAEKQISEQFTCELSKPTKNAFVRGHISGFGY--G 912

  Fly   964 TMQASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALIAGHRL 1028
            ..|..||.:||:.|.|..||::..:..|.|.||....|:..:..::::||.||.......|...:
plant   913 LSQFLAFCSYALGLWYVSVLINHKETNFGDSIKSFMVLIVTAFSVSETLALTPDIVKGTQALGSV 977

  Fly  1029 FQILDRKPKIQSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVAL 1092
            |::|.|:.|| ||    ....::.::..:| :.:|.:.|.|||||:..|...|:|.|..|:::|:
plant   978 FRVLHRETKI-SP----DQPNSRMVSQVKGDIEFRNVSFVYPTRPEIDIFKNLNLRVSAGKSLAV 1037

  Fly  1093 VGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIA 1157
            ||.||.||||.:.|:.|:|||..|.:.||..||: .|.|..:|.||.:|.|||.||..:|.|||.
plant  1038 VGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDIK-TLNLRSLRKKLALVQQEPALFSTTIYENIK 1101

  Fly  1158 YGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKIL 1222
            ||:  .:.|..||:.|||:||||.|||.:..||.|..|.:|.|||||||||:|||||::::|.:|
plant  1102 YGN--ENASEAEIMEAAKAANAHEFIIKMEEGYKTHAGDKGVQLSGGQKQRVAIARAVLKDPSVL 1164

  Fly  1223 LLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLIS 1287
            ||||||||||..||:|||:|||....|||.:::||||||::.||.:.|:..|:|||:|:|.:|:|
plant  1165 LLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGSHRELVS 1229

  Fly  1288 -QGGIYAKLHKTQK 1300
             ..|.|.:|...|:
plant  1230 IPNGFYKQLTSLQE 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 213/528 (40%)
MdlB 711..1299 CDD:440747 221/598 (37%)
ABCB13NP_174115.1 PTZ00265 54..1241 CDD:240339 462/1263 (37%)

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