DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and ABCB1

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_181228.1 Gene:ABCB1 / 818265 AraportID:AT2G36910 Length:1286 Species:Arabidopsis thaliana


Alignment Length:1314 Identity:464/1314 - (35%)
Similarity:705/1314 - (53%) Gaps:96/1314 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIYSEFTSMLVDRAM 81
            ||...||    ...:||.:||||:...:...:..|.:...:...:||.       |.....|...
plant    17 EEPKKAE----IRGVAFKELFRFADGLDYVLMGIGSVGAFVHGCSLPL-------FLRFFADLVN 70

  Fly    82 QFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMFISGIFSVDVFNMVA 146
            .||::||                    |.|.:.::.:.|.:...:....::.|....:..:....
plant    71 SFGSNSN--------------------NVEKMMEEVLKYALYFLVVGAAIWASSWAEISCWMWSG 115

  Fly   147 LRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMV----DDVEKIRDGISEKVGHFVYLVVGFI 207
            .||.|:||||...:.:.|||.:.|...:   |..:|    .|...::|.||||:|:|::.:..|:
plant   116 ERQTTKMRIKYLEAALNQDIQFFDTEVR---TSDVVFAINTDAVMVQDAISEKLGNFIHYMATFV 177

  Fly   208 ITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVS 272
            ....:.|:..|:|.|...:.:||:.::.........||:.:.|||.:.|||:.|:.:..||.|::
plant   178 SGFIVGFTAVWQLALVTLAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMA 242

  Fly   273 FGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKE 337
            |.||....|.|.:.|..|:|.....|...|:.......:::...|...|||..|:       ...
plant   243 FVGESRASQAYSSALKIAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLV-------RHH 300

  Fly   338 YTPAILMIA-FFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLLNYGL 401
            .|...|.|| .|.:::|...:.::||.:.:||.|:..|..:|::||....|:..|..|..|: .:
plant   301 LTNGGLAIATMFAVMIGGLALGQSAPSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELD-SV 364

  Fly   402 RGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLL 466
            .|.||.::|.|.|||||:|.:.....:.:.||:|:|||||||.||||.|.|::|||||..|.|||
plant   365 TGLVELKNVDFSYPSRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLL 429

  Fly   467 DDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPE 531
            |..|::...::|||..|.:|.|||.||..:|.:||..|:|.|.|.|||.||..|.||.||..||:
plant   430 DGQDLKTLKLRWLRQQIGLVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPD 494

  Fly   532 SYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTI 596
            .:.:.:||||.|||||||||||||||:::||.||||||||||||.:|||.||:|||....||||:
plant   495 GFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTL 559

  Fly   597 VVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMAL--EGAYYNMVRAGDINMPDEVEKEDSIEDT 659
            :::||||.||.||.:..:..|.|.|.|:||:|.:.  .|.|..:::.      .|...|.::.:.
plant   560 IIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIKM------QEAAHETAMSNA 618

  Fly   660 KQKSL-ALFEKSFETSPLNFEKGQKNSVQFEEPIIKALIKDTNAQ---SAEAPPEKPNF------ 714
            ::.|. ....::..:||:.    .:||.....|..:.|...:.:.   |.:| ...||:      
plant   619 RKSSARPSSARNSVSSPIM----TRNSSYGRSPYSRRLSDFSTSDFSLSIDA-SSYPNYRNEKLA 678

  Fly   715 FR----TFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALAEKDPEDALRRTAVL 775
            |:    :|.|:.::...||.|.:||::.:|..|.|...||.:.....:.....|.|..:::....
plant   679 FKDQANSFWRLAKMNSPEWKYALLGSVGSVICGSLSAFFAYVLSAVLSVYYNPDHEYMIKQIDKY 743

  Fly   776 SWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSG 840
            .:..:||:....:...||...::..|..||.|:|....:|::..|:.|||.|.|....::|||:.
plant   744 CYLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKMLSAVLKNEMAWFDQEENESARIAARLAL 808

  Fly   841 EAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVR 905
            :|.:::.|||..:|.::|..:..:.:.:......|:|||:.:|..|::|.:.:|:...|:.....
plant   809 DANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGD 873

  Fly   906 EKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNST----MQ 966
            .:....:..::|.|:|.|:||||....||.::|.||..::..    .::..|:|.:..:    .|
plant   874 LEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYTANLEPP----LKRCFWKGQIAGSGYGVAQ 934

  Fly   967 ASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALIAGHRLFQI 1031
            ...:.:||:.|.|...||..|...|...|:|...|:..:...|::|...|.|.....|...:|::
plant   935 FCLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMRSVFEL 999

  Fly  1032 LDRKPKIQ--SPMGT-IKNTLAKQLNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALV 1093
            ||||.:|:  .|..| :.:.|..::.|      :.|.|.||:|||.:|...|.|....|:|:|||
plant  1000 LDRKTEIEPDDPDTTPVPDRLRGEVEL------KHIDFSYPSRPDIQIFRDLSLRARAGKTLALV 1058

  Fly  1094 GHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFERSIAENIAY 1158
            |.||||||:.:.|:||:|:|..|.:.||..||: ...|..:|..:.||.|||.||..:|.|||||
plant  1059 GPSGCGKSSVISLIQRFYEPSSGRVMIDGKDIR-KYNLKAIRKHIAIVPQEPCLFGTTIYENIAY 1122

  Fly  1159 GDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILL 1223
            |  ....:..|||.||..|:||.||.:||.||.|.:|.||.||||||||||||||||||..:|:|
plant  1123 G--HECATEAEIIQAATLASAHKFISALPEGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIML 1185

  Fly  1224 LDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQ 1288
            |||||||||.:||:.||:|||.||||||.||:||||||::||.||.||.:|:|.|||:|..|:..
plant  1186 LDEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKN 1250

  Fly  1289 --GGIYAKLHKTQK 1300
              .||||::.:.|:
plant  1251 HPDGIYARMIQLQR 1264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 205/529 (39%)
MdlB 711..1299 CDD:440747 226/606 (37%)
ABCB1NP_181228.1 MdlB 42..610 CDD:440747 217/611 (36%)
MdlB 680..1263 CDD:440747 223/595 (37%)

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