DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and abcb9

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001119906.1 Gene:abcb9 / 570148 ZFINID:ZDB-GENE-050517-12 Length:789 Species:Danio rerio


Alignment Length:732 Identity:228/732 - (31%)
Similarity:350/732 - (47%) Gaps:131/732 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AFLKLFRFSTYGEI---GWLFFGFIMCCIKALTLPAVVIIY---------------SEFTSMLVD 78
            |..||...|..|.:   .|....|...|:.|:   .|:|.:               ||.|..|||
Zfish    97 ALAKLLMLSEEGNLMYDPWFLSLFSWTCVAAI---GVMIFWKILSQTPNAVSDREDSEDTERLVD 158

  Fly    79 -------RAMQFGTSSNVHA----------------------------------LPLFGGGKTLT 102
                   ::|:.| ..:.|:                                  :|.: .|:.:.
Zfish   159 ETEDESEKSMKSG-KEHTHSGATIGRLLSYCKKDSSLLSIAFFFLLLSAVCEAFIPYY-TGQAID 221

  Fly   103 NASREENNEALYDDSISYGILLTIASVVM-FISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDI 166
            ....:::.:......|:..:|..::|:.: |..|:|||     ...|...|:|..||.|::.|:|
Zfish   222 GIVIQKSMDHFAKPMITLSVLALVSSIAIGFRGGVFSV-----TFARLNIRLRNLLFRSLMHQEI 281

  Fly   167 GWHDLASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLV 231
            |:.|.....:.|..:..|..::.|.||:.|..|:...|..:......|...|||::......|.:
Zfish   282 GFFDANHTGDITSRLTSDTTQVSDLISQNVNLFLRSFVKAVGIFIFMFGMSWKLSVVTIMGFPYI 346

  Fly   232 ILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRY-----ENFLVPAR 291
            .:::....::..|||...|.:.|.|..:|||.:|::|||.||..|..|...|     |.|::..:
Zfish   347 AVVSKLYGEYYKKLTKEVQTALAQANKVAEETISAMRTVRSFANEDQEGDMYYSRLQEMFVLNKK 411

  Fly   292 KA-----SQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGII 351
            :|     ..|....|.|  |:..::|:        ||.:|:     |.|:.....::....:.:.
Zfish   412 QAIAYACFMWSSYISEL--ALQVAILF--------YGGHLV-----VTNQMSGGTLISFVIYELE 461

  Fly   352 VGADNIARTAPFLESFATAR-------GCATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDVEFQD 409
            :|        ..|||.::..       |.|..:|:.||...|   .:.:|:.....|.|.|||.:
Zfish   462 LG--------EALESISSVYTGLMQGVGAAEKVFEYIDRKPK---HALNGQEAPETLEGQVEFNN 515

  Fly   410 VFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKY 474
            |.|.||||||:.|.:.::..:|.||..||||.||.|||:||.||:.||.|..|.||:|...:..|
Zfish   516 VTFAYPSRPEMDVLKNVSFSLRPGQVTALVGPSGGGKSSCVCLLENFYAPQQGQVLVDGRPVNTY 580

  Fly   475 NIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGE 539
            ..::..|.:|:|.||||||..|:..|||||.|.|..:.:..||..|.||:|||.|.:.|.|.:||
Zfish   581 QHKYYHSKVALVAQEPVLFARTVQMNISYGVPEAPMEAVIRAAINANAHDFITGLSKGYDSGVGE 645

  Fly   540 RGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSA 604
            :|:|||||||||:|||||||::|:||:|||||||||.:||..|||||:...:..|.:|::||||.
Zfish   646 KGTQLSGGQKQRVAIARALIRSPRILILDEATSALDSESEYIVQQALNNLMREHTVLVIAHRLST 710

  Fly   605 IRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVR----AGDINMPD---------EVEKEDSI 656
            :..||.|:.|..|.|:|:|.|.:|||..|.|..:|:    ..:|::.|         |::.||  
Zfish   711 VERADNILVIDKGSVVEQGPHAELMARGGLYCKLVQRQILGTEIDVDDKNPSPAPTWELKTED-- 773

  Fly   657 EDTKQKSLALFEKSFET 673
               |:.:....:..:||
Zfish   774 ---KENAEDCSDTEYET 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 198/544 (36%)
MdlB 711..1299 CDD:440747
abcb9NP_001119906.1 3a01208 46..745 CDD:273363 219/683 (32%)
Blue background indicates that the domain is not in the aligned region.

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