DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and Abcb9

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_063928.2 Gene:Abcb9 / 56325 MGIID:1861729 Length:762 Species:Mus musculus


Alignment Length:632 Identity:203/632 - (32%)
Similarity:319/632 - (50%) Gaps:93/632 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 APPEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALA------EKDP 765
            ||.|:.: ..|..::|...|.:..:|:     |.:...:..|....|..:|...|      :|..
Mouse   160 APAEQAS-GATLQKLLSYTKPDVAFLV-----AASFFLIVAALGETFLPYYTGRAIDSIVIQKSM 218

  Fly   766 EDALRRTAVLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNS 830
            :.......|:   || ||..:.|...::..:|......|..|:|...|.::|:||..:||:  |.
Mouse   219 DQFTTAVVVV---CL-LAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDE--NR 277

  Fly   831 VGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMY-YNWKLALLCLANCPIIVGSVIL 894
            .|.|.:||:.:...:...:...::..::.... ::.|.|.|: .:|:|:|:.....|||:     
Mouse   278 TGDLISRLTSDTTMVSDLVSQNINIFLRNTVK-VTGVVVFMFSLSWQLSLVTFMGFPIIM----- 336

  Fly   895 EAKMMSN-------AVVREKQ-VIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLI 951
               |:||       .:.:|.| .:..|...|.|:|:.::||          |.:..|.:..||.:
Mouse   337 ---MVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKTV----------RSFANEEEEAEVFL 388

  Fly   952 RQKLRWRGVLNSTMQASAFFAY------------AVALCYGGVLVSEGQLPFQDIIKVSETLLYG 1004
            | ||:....|| ..:|:|:.:|            ...|.|||.||..||:...::|..   ::| 
Mouse   389 R-KLQQVYKLN-RKEAAAYMSYVWGSGLTLLVVQVSILYYGGHLVISGQMSSGNLIAF---IIY- 447

  Fly  1005 SMMLAQSLAFTPAFSAALIAG----HRLFQILDRKPKIQSPMGTIKNTLAKQLNL----FEG-VR 1060
            ..:|...:....:..:.|:.|    .::|:.:||:|           |:....:|    .|| |.
Mouse   448 EFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQP-----------TMVHDGSLAPDHLEGRVD 501

  Fly  1061 YRGIQFRYPTRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDI 1125
            :..:.|.|.|||..::|..:...:..|:..||||.||.|||:||.:|:.:|....|.:.:|...|
Mouse   502 FENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPI 566

  Fly  1126 ---QHDLTLDGVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLP 1187
               .|..    :...:.:|||||.||.|||.:||:||  ..:|....::.||:.||||.||:.|.
Mouse   567 GAYDHKY----LHRVISLVSQEPVLFARSITDNISYG--LPTVPFEMVVEAAQKANAHGFIMELQ 625

  Fly  1188 NGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTC 1252
            :||.|..|.:|.|||||||||:|:||||||||.:|:|||||||||.:||.|:|||:.......|.
Mouse   626 DGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTV 690

  Fly  1253 IVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQGGIYAKLHKTQ 1299
            ::||||||||:.|.:|.|:..|:||:||.|.||::|||:||||.:.|
Mouse   691 LIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQ 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 199/626 (32%)
Abcb9NP_063928.2 3a01208 44..734 CDD:273363 201/627 (32%)
Blue background indicates that the domain is not in the aligned region.

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