DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and Abcb10

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_062425.1 Gene:Abcb10 / 56199 MGIID:1860508 Length:715 Species:Mus musculus


Alignment Length:607 Identity:210/607 - (34%)
Similarity:326/607 - (53%) Gaps:59/607 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   720 RILQLAKQEWCYLILGTISAVAVGFLYPAFAV----------IFGEFYAALAEKDPEDALRRTAV 774
            ::|.|.:.|     .|.:|| |||||..:..:          |....|...:|...:...|..||
Mouse   124 KLLGLVRPE-----RGRLSA-AVGFLAVSSVITMSAPFFLGRIIDVIYTNPSEGYGDSLTRLCAV 182

  Fly   775 LSWACLGLAFLTGLVC-FLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARL 838
            |:  |:   ||.|... .::.||...:|..:..|:|...|::::.|||.:||  ....|.|..||
Mouse   183 LT--CV---FLCGAAANGIRVYLMQSSGQSIVNRLRTSLFSSILRQEVAFFD--KTRTGELINRL 240

  Fly   839 SGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAV 903
            |.:...:..::...||..::|.:.....|.:..:.:..||...|:..|.|....::..:.:....
Mouse   241 SSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLATFVLSVVPPISVLAVIYGRYLRKLS 305

  Fly   904 VREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNSTMQAS 968
            ...:..:.||.::|.|.|.||||:....:|...:.:||..:.::..|.:::         .:..:
Mouse   306 KATQDSLAEATQLAEERIGNIRTIRAFGKEMTEVEKYTGRVDQLLQLAQKE---------ALARA 361

  Fly   969 AFFAYA--------VALCY-GGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALI- 1023
            .||..|        :::.| ||:|:....:   .:.::|..|:| :..:..|:....:|.:.|: 
Mouse   362 GFFGAAGLSGNLIVLSVLYKGGLLMGSAHM---TVGELSSFLMY-AFWVGLSIGGLSSFYSELMK 422

  Fly  1024 ---AGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKILNGLDLEV 1084
               ||.||:::|:|:|::....|.:.:.     ..|:| :.:|.:.|.||.||:..:.....|.:
Mouse   423 GLGAGGRLWELLERQPRLPFNEGMVLDE-----KTFQGALEFRNVHFTYPARPEVSVFQDFSLSI 482

  Fly  1085 LKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFE 1149
            ..|...||||.||.||||.|.||.|.|||:.||:.:|..||: .|....:|:|:|.|||||.||.
Mouse   483 PSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGTVSLDGHDIR-QLNPVWLRSKIGTVSQEPVLFS 546

  Fly  1150 RSIAENIAYG-DNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIAR 1213
            .|:||||||| ||..||:..::..||:.|||..||.|.|.|:||.:|.:|..|||||||||||||
Mouse   547 CSVAENIAYGADNLSSVTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIAR 611

  Fly  1214 ALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVE 1278
            ||::|||||||||||||||.::|.|||:|||....|||.::|||||||::||:.:.|:.:|::.|
Mouse   612 ALLKNPKILLLDEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLDHGKICE 676

  Fly  1279 QGNHMQ-LISQGGIYAKLHKTQ 1299
            .|.|.: |:...|:|.||...|
Mouse   677 HGTHEELLLKPNGLYRKLMNKQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 209/605 (35%)
Abcb10NP_062425.1 MdlB 115..699 CDD:440747 210/607 (35%)
Blue background indicates that the domain is not in the aligned region.

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