DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and abcb8

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001017544.1 Gene:abcb8 / 548340 ZFINID:ZDB-GENE-050410-6 Length:714 Species:Danio rerio


Alignment Length:602 Identity:209/602 - (34%)
Similarity:321/602 - (53%) Gaps:64/602 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   731 YLILGTI----SAVAVGFLYPAFAVIFGEFYAALAEKDPEDA---LRRTAVLSWACLGLAFLTGL 788
            :.::|.|    .|.|:....|   ::.|:....:|....|.|   :|.....:...|||..|.||
Zfish   144 FALMGAILLAFGAAALNIQIP---LMLGDLVNVVARHMREQAGHYMRDIQAPAVKLLGLYALQGL 205

  Fly   789 VCFLQTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPL 853
            :......|.:..|..:...||...|.:::.|::.:||  .|..|.|..||:.:..:.:.:....:
Zfish   206 LTSGYIILLSRVGERVAADMRTTLFTSLLRQDIAFFD--ANKTGQLVNRLTSDIQEFKSSFKLVI 268

  Fly   854 SGMIQALSNFISSVS--VAMYY-NWKLALLCLANCPIIVGSVILEAKMMSNAVVREKQVIEEACR 915
            |   |.|.:...:|.  |::|: :.||..|.:...|.:||:..|....:.....:.::.:.:|..
Zfish   269 S---QGLRSATQTVGCFVSLYFISPKLTGLTVVVLPCLVGAGALIGSFLRKLSRKAQEQVAKATG 330

  Fly   916 IATESITNIRTVAGLRREADVIREYTEEIQRV----EVLIRQKLRWRGVLNSTMQA---SAFFAY 973
            :|.|::.|:|||.....|...:..|..|:|:.    |.|......::|:.|..:..   ...|| 
Zfish   331 VADEALGNVRTVRAFAMEDRELEMYAAEVQKSAAMNETLGTGIAVFQGLSNIVLNCIVLGTIFA- 394

  Fly   974 AVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALI----AGHRLFQILDR 1034
                  ||.|::...|...|::    :.|..|..:.:|||........::    ||.|:|:.|..
Zfish   395 ------GGSLMARDDLSPGDLM----SFLVASQTVQRSLASISILFGQMVRGMSAGARVFEYLAL 449

  Fly  1035 KPKI------QSPMGTIKNTLAKQLNLFEGVRYRGIQFRYPTRPDAKILNGLDLEVLKGQTVALV 1093
            .|.:      :.|:.          :|...|.:..|.|.|||||..:||....|.:...:|||:|
Zfish   450 DPSVPLTGGGRIPLD----------SLMGRVDFMNISFSYPTRPGNQILKHFSLTLPPCKTVAIV 504

  Fly  1094 GHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTK---LGIVSQEPTLFERSIAEN 1155
            |.||.||||...||:|:|||..|.:.:|..||:   |||....:   :|.:||||.||..|:.||
Zfish   505 GESGGGKSTVAALLERFYDPSSGVVMLDGLDIR---TLDPSWLRGHVIGFISQEPVLFGTSVMEN 566

  Fly  1156 IAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPK 1220
            |.:|  :.|.:..|:::|||.||||:||....:||:|.:|.||..||||||||||||||||:||.
Zfish   567 IRFG--KPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPS 629

  Fly  1221 ILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQL 1285
            ||:|||||||||.:||::||:|||.|.:|||.::|||||||:|.||:|||:.||::||.|.|::|
Zfish   630 ILILDEATSALDAESERVVQEALDRATTGRTVLIIAHRLSTIQAADLICVMSNGRIVEAGTHLEL 694

  Fly  1286 ISQGGIYAKLHKTQKDH 1302
            :|:||:||:|.|.|:.:
Zfish   695 LSKGGLYAELIKRQRSN 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 208/597 (35%)
abcb8NP_001017544.1 MdlB 131..708 CDD:440747 208/597 (35%)
Blue background indicates that the domain is not in the aligned region.

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