DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and Mdr50

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_523740.3 Gene:Mdr50 / 36582 FlyBaseID:FBgn0010241 Length:1313 Species:Drosophila melanogaster


Alignment Length:1327 Identity:540/1327 - (40%)
Similarity:780/1327 - (58%) Gaps:95/1327 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERDEVSTSSSEGKSQEEAPMAEGLEPTEPIAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVV 66
            :.||...|..|..||..       |..:.:::.:|||::|..:......|.:......||.||..
  Fly    49 KHDESDASDEEDGSQYH-------EDVKQVSYFQLFRYATKKDRALYVIGLLSAVATGLTTPANS 106

  Fly    67 IIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSIS---------YGI 122
            :|:....:.::|                .||       ..|.......||:||         :.:
  Fly   107 LIFGNLANDMID----------------LGG-------LLESGKSYRADDAISTLLLDKVRQFSL 148

  Fly   123 LLTIASVVMFISGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEK 187
            ..|...::|.:....|:..||..|..|:..:|.|.|.|::.||:.|:|..........|.:|:.|
  Fly   149 QNTYIGIIMLVCSYLSITCFNYAAHSQILTIRSKFFRSILHQDMKWYDFNQSGEVASRMNEDLSK 213

  Fly   188 IRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQES 252
            :.||::|||..||:.:|.|:.::.::|..||:|:|...:.:||..:....||....:|..:|...
  Fly   214 MEDGLAEKVVMFVHYLVAFVGSLVLAFVKGWQLSLVCLTSLPLTFIAMGLVAVATSRLAKKEVTM 278

  Fly   253 YAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKASQWKGAFSGLSDAVLKSMLYLSCA 317
            ||||..:||..||.||||.:|.||..||..|:..:|.|:..:..:..|||:...:|...:|.|.|
  Fly   279 YAGAAVVAEGALSGIRTVKAFEGEAKEVAAYKERVVAAKILNIKRNMFSGIGFGLLWFFIYASYA 343

  Fly   318 GAFWYGVNLII---DDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFK 379
            .||||||.|:|   .:...||  |....::..||.:::|:.||...||::|:|..|:|....:|.
  Fly   344 LAFWYGVGLVIKGYHEPAYEN--YDAGTMITVFFSVMMGSMNIGMAAPYIEAFGIAKGACAKVFH 406

  Fly   380 VIDLTSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGC 444
            :|:...:|:|:..:||.||..|. .:||::|.|:||:||||.:...||::|..||||||||.|||
  Fly   407 IIEQIPEINPIDGEGKKLNEPLT-TIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGC 470

  Fly   445 GKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGAT 509
            |||||:||:||||||..|::|.:..:::..:|.||||.|.||||||:||..:|.:||.||:..||
  Fly   471 GKSTCIQLVQRFYDPQAGNLLFNGTNLKDLDINWLRSRIGVVGQEPILFATSIYENIRYGREDAT 535

  Fly   510 QKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSAL 574
            ::||||||..|.|..||..||:.|.:::||||:|||||||||||||||||::|:|||||||||||
  Fly   536 REEIEAAAAAANAAIFIKKLPKGYDTLVGERGAQLSGGQKQRIAIARALIRDPEILLLDEATSAL 600

  Fly   575 DYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMV 639
            |..||.:||.||:..|.|||||:|:||||.:|.||:||.|:.|:|:|.|:|.:||.|:..|:|:|
  Fly   601 DTASEAKVQAALEKVSAGRTTIIVAHRLSTVRRADRIVVINKGEVVESGTHQELMELKDHYFNLV 665

  Fly   640 R-------------AGDINMPDEVEKEDSIEDTKQKSLALFEKSFETSPLNFEKGQKNSVQFEEP 691
            .             .|||....:::.||. |:.|    .|.|...|...:..||.:|..      
  Fly   666 TTQLGEDDGSVLSPTGDIYKNFDIKDEDE-EEIK----VLSEDEDEDVMVTDEKNKKKK------ 719

  Fly   692 IIKALIKDTNAQSAEAPPEKPNFFRTFSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEF 756
              |..:||            ||..:....::::.|.||..:.:|.||:|.:|...|.|||:||..
  Fly   720 --KKKVKD------------PNEVKPMLEVMKMNKPEWLQIAVGCISSVIMGCAMPIFAVLFGSI 770

  Fly   757 YAALAEKDPEDALRRTA---VLSWACLGLAFLTGLVCFLQTYLFNYAGIWLTTRMRAMTFNAMVN 818
            ...|:.||.:..:|..:   .|.:...|:  :.|:..|||.|.|..||..||.|:|.:.|.||:.
  Fly   771 LQILSVKDNDQYVRENSNQYSLYFLIAGI--VVGIATFLQIYFFGIAGERLTERLRGLMFEAMLR 833

  Fly   819 QEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLA 883
            |||.||||:.|..|:|.|||||:|..:|||.|..:..::|::|.....::::|||.|.|.|:.||
  Fly   834 QEVAWFDDKANGTGSLCARLSGDAAAVQGATGQRIGTIVQSISTLALGIALSMYYEWSLGLVALA 898

  Fly   884 NCPIIVGSVILEAKMMSNAVVREKQVIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVE 948
            ..|.|:.:..::..:|:...:...:.:|...::|.|.::||||||.|.||....:.|...:....
  Fly   899 FTPFILIAFYMQRTLMAKENMGSAKTMENCTKLAVEVVSNIRTVASLGREEMFHQNYIGMLIPAV 963

  Fly   949 VLIRQKLRWRGVLNSTMQASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLYGSMMLAQSLA 1013
            .:.::...:||::....::..|||||..:.||...|....:.|.|:.|||:.|:.|:..:|.:||
  Fly   964 EISKRNTHFRGLVYGLARSLMFFAYAACMYYGTWCVIHRGILFGDVFKVSQALIMGTASIANALA 1028

  Fly  1014 FTPAFSAALIAGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKIL 1077
            |.|.....:.|...:|..|.|:|.|....|..::....     || ||:..::|.||||.:.::|
  Fly  1029 FAPNMQKGVSAAKTIFTFLRRQPSIVDRPGVSRDPWHS-----EGYVRFDKVKFSYPTRSEIQVL 1088

  Fly  1078 NGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVS 1142
            .||:|.|.|||.:||||.||||||||:||:||:||.|||...||..|:: ::::..:|.:|||||
  Fly  1089 KGLELAVSKGQKIALVGPSGCGKSTCIQLIQRFYDVDEGATLIDECDVR-NVSMTNLRNQLGIVS 1152

  Fly  1143 QEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQ 1207
            |||.||:|:|.|||:||||.|:|:..|||:|.|.:|.|.||.:||.|||||||.:|.||||||||
  Fly  1153 QEPILFDRTIRENISYGDNARNVTDQEIISACKKSNIHEFIANLPLGYDTRMGEKGAQLSGGQKQ 1217

  Fly  1208 RIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQ 1272
            ||||||||:|||||:||||||||||.:||::||.|||.|..|||.|.||||||||.::|||.|.:
  Fly  1218 RIAIARALIRNPKIMLLDEATSALDAESEKVVQDALDAASEGRTTISIAHRLSTVVHSDVIFVFE 1282

  Fly  1273 NGQVVEQGNHMQLISQGGIYAKLHKTQ 1299
            ||.|.|.|:|.||::..|:|..|:|.|
  Fly  1283 NGLVCEAGDHKQLLANRGLYYTLYKLQ 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 239/547 (44%)
MdlB 711..1299 CDD:440747 261/591 (44%)
Mdr50NP_523740.3 PTZ00265 69..1308 CDD:240339 531/1297 (41%)

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