DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and CG1824

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster


Alignment Length:604 Identity:209/604 - (34%)
Similarity:326/604 - (53%) Gaps:54/604 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NNEALYDDSISYGILLTIASVVMFISGIFSVDVF--NMVALRQVTRMRIKLFSSVIRQDIGWHDL 171
            ||..:.|.|.....||   |:.|..||...:.::  :.|..:...:||..||:.::.|||.:.| 
  Fly   174 NNSFVKDVSKPASNLL---SLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFD- 234

  Fly   172 ASKQNFTQSMVD----DVEKIRDG----ISEKVGHFVYLVVGFIITVAISFSYGWKLTLAVSSYI 228
               :|.|..:|:    ||:..:..    :|:.:.....|:.|.|....||   .....:|::| :
  Fly   235 ---ENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMIS---PHMAAIALAS-V 292

  Fly   229 PLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFLVPARKA 293
            |.|::...|:.|....|:...|.....|..:.||.||:||||.|...|..|:|.:|.....|.:.
  Fly   293 PCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARL 357

  Fly   294 SQWKG----AFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGA 354
            :|..|    .|.||::..|.: |.||         .|.:....:..:..:|..|| ||.....|.
  Fly   358 AQKLGYGIAIFQGLTNFFLNT-LVLS---------TLFMGGHLMSTESLSPGALM-AFLVASQGV 411

  Fly   355 D-NIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLL-NYGLRGDVEFQDVFFRYPSR 417
            . ::|:.:..|.:........:.:|:.:.|..:::.|.  |.:: ...|.|::.|::|.|.||.:
  Fly   412 QRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLR--GYIIPQERLHGEIRFENVSFAYPMQ 474

  Fly   418 PEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSN 482
            |:.:|.:..::.:|.||||||||:||.||||...|::|||:|..|::.||...:...:..|||||
  Fly   475 PDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSN 539

  Fly   483 I-AVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSG 546
            : ..:.|:||||..:|.:||.||||.|.::::.|||..:.:|:|:|.||:.|.:.:||||:||||
  Fly   540 VLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSG 604

  Fly   547 GQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKI 611
            ||:|||||||||::||:||:|||||||||..||.:||:|||...:.|||:|::||||.||.||.|
  Fly   605 GQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLI 669

  Fly   612 VFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDINMPDEVEKEDSIED-----------TKQKSLA 665
            |.:..|:|:|.|.||:||...|.|:.:||..:  ..|..|:..::||           |:..:.|
  Fly   670 VVLDQGRVVETGKHDELMGKRGLYFELVRQQE--RRDIQEQVQAVEDVVAVKEQQATATETSTAA 732

  Fly   666 LFEKSFETSPLNFEKGQKN 684
            ....:.|||......|..:
  Fly   733 TIATAAETSAATVTVGSSS 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 194/539 (36%)
MdlB 711..1299 CDD:440747
CG1824NP_572810.1 MdlB 119..702 CDD:440747 199/553 (36%)
Blue background indicates that the domain is not in the aligned region.

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