DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and mam1

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_001018819.2 Gene:mam1 / 2540405 PomBaseID:SPBC25B2.02C Length:1336 Species:Schizosaccharomyces pombe


Alignment Length:1399 Identity:349/1399 - (24%)
Similarity:625/1399 - (44%) Gaps:217/1399 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSTSSSEGKSQEEAPMA--------------------EGLEPTEPIA-------FLKLFRFSTYG 43
            ::..|.|....:|:|.:                    :..:.||.:|       |..||.||   
pombe    38 ITNKSLETLRSQESPCSTTFPVSDRKDALLNIPTVVDDEFQHTEELAGVSSWSDFFYLFHFS--- 99

  Fly    44 EIGWLFFGFIMCCIKALTLPAVVIIYSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREE 108
            :|..:|...|..|:.|...|    :.:..|..:.|...|:.||.    :.|   ||.::      
pombe   100 DIPLIFGTLIFTCLSAALEP----LMTWTTGKVFDALSQYATSQ----ITL---GKMIS------ 147

  Fly   109 NNEALYDDSISYGILLTIASVVMFISG----IFSVDV-FNMVALRQVTRMRIKLFSSVIRQDIGW 168
                          |:...|:::.|.|    :||..| |....|..:...|.:        .:.:
pombe   148 --------------LINFNSLLITIFGLASCVFSFGVRFLWQYLSAIAGKRAR--------SLCF 190

  Fly   169 HDLASKQ----NFTQS---MVDDVEK----IRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTL 222
            |.|:||.    :.|:|   :|:.|::    ....||..:.|....:...:..:.|||.|.|.|||
pombe   191 HVLSSKSSTFYSLTESKSGLVNSVDRCIQFYEKSISLPMFHIAENLAISLSCLIISFRYSWSLTL 255

  Fly   223 AVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYENFL 287
            .|.:..|::||:..::..|......::::|...|.::.|:.:|:|:||:....:.:|.:.:.:..
pombe   256 VVLASYPIIILVVGFINSFLSSAYEKDRKSSEKAASILEKSISAIQTVIFHSMQDTEYRYFADAC 320

  Fly   288 VPARKA---SQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDR-NVENKEYTPAILMIAFF 348
            ..:.|:   ..:..||.|   .|.:..||.......|:|.:|....| ||..        ::..|
pombe   321 STSSKSFLRFSFLDAFQG---GVSQFFLYSVFFQGLWFGNHLATTKRVNVGQ--------VVTVF 374

  Fly   349 GIIVG-ADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLS----TDGKLLNYGLRGDVEFQ 408
            |..:. |.::.:..|.:...  .:|..::.| :..|....||:.    :..|:.:........|.
pombe   375 GSCLSVASSLQQILPAIPDL--IKGKFSSHF-IKTLCESHDPIEAAKRSAAKIKSISFERGFRFD 436

  Fly   409 DVFFRYPSRPEVIVHR-GLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLDIR 472
            :|.|.||||.|.:... .:::.|..|:.|.::|.||.||||.:.||.|::.|.:|::.|||..:.
pombe   437 NVSFAYPSRDENLFSLINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLE 501

  Fly   473 KYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRSMI 537
            :.:...|.|.|.:|.|:||:|..||.:||......|::.:.|.....|...||.....:||.:..
pombe   502 EIDEHVLGSTITLVCQQPVIFDMTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPC 566

  Fly   538 GERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRL 602
            .|  :.|||||:||||:||||:::.:||:|||.|||||..::..|..|:....||:||:|::|.:
pombe   567 KE--ASLSGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIRAHRKGKTTLVITHDM 629

  Fly   603 SAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVRAGDINMPDEVEKED--------SIEDT 659
            |.|...:.::.|..|.:::..:..:|:..|....|      :::.::|.||:        :.|..
pombe   630 SQINNDELVLVIDKGHLIQRCARKELVLFEDFENN------VSIDEKVLKEEADNPFILPNEESL 688

  Fly   660 KQKSLALFEKSFETSPLN----FEKGQKNSVQFEEPIIKALIKDTNAQSAEAPPEKPNFFRT--- 717
            .:|....:.:||  |.|:    |...:......|.|.|.:..|....:....  ||.:|..|   
pombe   689 LEKYWINYNESF--SQLSRESLFTSLESPFTDIESPTIVSRRKIVEQRKLRM--EKESFQETNVD 749

  Fly   718 ------------------FSRILQLAKQEWCYLILGTISAVAVGFLYPAFAVIFGEFYAALAEKD 764
                              |..|.::.|..| :.:||.::::..|...|.||.:..:......:.|
pombe   750 QTFHLFDDKEHACSLTLIFKSIWKVKKLRW-FFLLGLLTSLIQGASVPIFAYVISKCLNLFMQID 813

  Fly   765 PEDALRRTAVLSWACLGLAFLTGLVC----------FLQTYLFNY-AGIWLTTRMRAMTFNAMVN 818
            |.             :|:||.:.:|.          |...|:|:. |.|| ....|.:....:..
pombe   814 PS-------------IGVAFWSSMVLVVAAGSGASYFFSHYIFSISAKIW-CDHYRLLAVKVLFT 864

  Fly   819 QEVGWFDDENNSVGALSARLSGEAVDIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLA 883
            |:..|||...|....||..|.....|::..|...:..:..|.:..|..::.:....|:||.:.:|
pombe   865 QDQAWFDQIENYPLVLSKILVNNISDMRNMISSLIEEVFIAFTMAIIGIAWSFATGWRLAAVLVA 929

  Fly   884 NCPIIVGSVILEAKMMSNAVVREKQVIEEACRIATESITNIRTVAGLRREADVIREYT------- 941
            ..||:    .|.::|.|...|..:::.::.. |:|.||.: :|:..|    |.|:.|:       
pombe   930 VSPIL----CLTSRMFSYIYVSTERMCQDVV-ISTTSILH-KTIVNL----DTIKGYSVLSFFRE 984

  Fly   942 ---EEIQRVEVLIRQKLRWRGVLNSTMQASAFFAYAVALCYGGVLVSEGQLPFQDIIKVSETLLY 1003
               ..:::.....:::..|..:..:...:..:|..|:......:.:|:.....:.:::|.....:
pombe   985 NHKNSLRKSWEAFKRRAFWTSLGFAINNSLLYFVRALLFYCSSIFISKEFYTVEQMVQVLSLATF 1049

  Fly  1004 GSMMLAQSLAFTPAFSAALIAGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEGVRYRGIQFRY 1068
            ..:|.:..:...|..||:.||..|:.::...||......|.:|..|..:      :.:.|:.|.|
pombe  1050 TLLMASTCIMSLPNVSASRIATSRVLKLSSLKPGNLHKSGYLKFPLVGK------IEFDGVSFAY 1108

  Fly  1069 P-TRPDAKILNGLDLEVLKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLD 1132
            | :..:...||.:.|.:...:.||:||.||.||||.|:||::.|..::  |:||...:. ::..:
pombe  1109 PDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYPSED--IYIDGYPLT-NIDTN 1170

  Fly  1133 GVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGAR 1197
            .:..|:.||.|:|.|...:|.|::.||.:|...|:::   |.........|.:||||.||.:...
pombe  1171 WLLKKVAIVDQKPHLLGSTILESLLYGVDRDINSVMD---ALDKTYMTEVIQNLPNGLDTPLLEF 1232

  Fly  1198 GTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQAL-DTACSGRTCIVIAHRLST 1261
            ....||||.||:|.||||:|||::|:|||.|||||.:|..|:::.: :.:|   |.::|.|:.|.
pombe  1233 SKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLSC---TVLIITHQPSL 1294

  Fly  1262 VQNADVICVIQNGQVVEQGNHMQLISQGGIYAKL 1295
            ::.||.|.|:.:|.|.|.|:..:|:::...:.||
pombe  1295 MKLADRIIVMDSGIVKESGSFDELMNRHTHFWKL 1328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 149/548 (27%)
MdlB 711..1299 CDD:440747 159/629 (25%)
mam1NP_001018819.2 MdlB 103..649 CDD:440747 159/600 (27%)
MdlB 768..1328 CDD:440747 154/599 (26%)

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