DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and haf-2

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:NP_495537.2 Gene:haf-2 / 174204 WormBaseID:WBGene00001812 Length:773 Species:Caenorhabditis elegans


Alignment Length:647 Identity:210/647 - (32%)
Similarity:329/647 - (50%) Gaps:67/647 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TSSSEGKSQEEAPMAEGLEPTEPIAFLK--LFRFSTYGEIGWLFF--GFIMCCIKALTLPAVVII 68
            |::...:..|.|...|....|.|.|.|.  |.|..:|....|.:|  ||:...:.||   |.|.|
 Worm   167 TAAETVRDTETASNVESGSSTAPRAPLHKVLLRLLSYCGHQWPWFASGFVFLTVYAL---ARVFI 228

  Fly    69 YSEFTSMLVDRAMQFGTSSNVHALPLFGGGKTLTNASREENNEALYDDSISYGILLTIASVVMFI 133
            .:....::.|...:.|..:.:|::                             |:||..:....:
 Worm   229 PNYTAQVISDIVNKRGIQALIHSI-----------------------------IVLTCLTATSSL 264

  Fly   134 SGIFSVDVFNMVALRQVTRMRIKLFSSVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGH 198
            .|......|:........|:|:.||:|:|||||.::|.|...:....:..|.:.|...:|..|..
 Worm   265 FGGLRGGCFDYATALVTLRIRLDLFTSLIRQDIAFYDTAKTGDTMSRLTSDCQTISSTVSTNVNV 329

  Fly   199 FVYLVVGFIITVAISFSYGWKLTLAVSSYIPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEI 263
            |:...|..|..:|......|:|.:.....:|||..:....:.|..|::.:.|::.|....:|||:
 Worm   330 FMRNGVMLIGALAFMILMSWRLAMVTFIAVPLVGFITKAYSSFYDKISEKLQQTIAETNQMAEEV 394

  Fly   264 LSSIRTVVSFGGEKSEVQRYENFLVPA----RKAS------QWKGAFSGLSDAVLKSMLYLSCAG 318
            :|::|||.||..||.|::|:|:.|...    ||.|      .|...|  ..:|:|.::|:     
 Worm   395 VSTMRTVRSFACEKKELKRFEDRLSSTLSVNRKKSIAYLFYTWNNEF--CDNAILVAVLF----- 452

  Fly   319 AFWYGVNLIIDDRNVENKEYTPAILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDL 383
               ||.:|::..: :|.::....:|.....|     :|:...:..:.....|.|.:.   ||.||
 Worm   453 ---YGGHLVMTGK-MEKEQLITFLLYQMQLG-----ENLYYLSYVMSGLMEAVGASR---KVFDL 505

  Fly   384 TSKIDPLSTDGKLLNYGLRGDVEFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKST 448
            .::......||....: :.|::.|..|.|.|||||...|.:.|.:.|::|:||||||.||.|||:
 Worm   506 MNRKPQFELDGMQRPF-VNGNITFSHVGFTYPSRPNNPVLKDLTLSIKSGETVALVGPSGGGKSS 569

  Fly   449 CVQLLQRFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEI 513
            .|.|::.||:|..|||.||.:.|:..|..:....:|:|.|||||:.|::..||.||...||:.::
 Worm   570 IVSLIEHFYEPDEGSVTLDGVPIKDINHVYYHQKVALVAQEPVLYNGSVRHNILYGCDFATEDDM 634

  Fly   514 EAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQS 578
            ..|:..|..|:|:..|.:.|.:..||:|.|:||||||||||||||::||.:|:|||||||||.:|
 Worm   635 LNASKMANVHDFVMELEKGYDTNCGEKGVQMSGGQKQRIAIARALVRNPAVLILDEATSALDTES 699

  Fly   579 EKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMA-LEGAYYNMV 639
            |..|||||...::.||.|:|:||||.|..|:||..|..|.:::.|:|.:||. .:|.||::|
 Worm   700 EALVQQALSRCAQERTVIIVAHRLSTIEKANKIAVIVKGCLVQMGTHTELMTDTDGMYYSLV 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 187/533 (35%)
MdlB 711..1299 CDD:440747
haf-2NP_495537.2 3a01208 15..761 CDD:273363 209/645 (32%)
Blue background indicates that the domain is not in the aligned region.

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