DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and tap1

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_002665053.1 Gene:tap1 / 100333043 ZFINID:ZDB-GENE-050517-43 Length:731 Species:Danio rerio


Alignment Length:625 Identity:203/625 - (32%)
Similarity:326/625 - (52%) Gaps:78/625 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IAFLKLFRFSTYGEIGWLFFGFIMCCIKALTLPAVVIIYSEFTSMLVDRAMQFGTSSNVHALPLF 95
            :.::|.|.    |....:||..::..:..:.:|       .:|..:.|..|              
Zfish   152 LGYMKPFS----GRFAAVFFFVVISSLGEMAIP-------HYTGKMTDWIM-------------- 191

  Fly    96 GGGKTLTNASREENNEALYDDSISYGILLTIASVVM-FISGIFSVDVFNMVALRQVTRMRIKLFS 159
                      .|:..|| ::.:|:...|:||.|.|. |:..:    ::|:...|..|.::..:|.
Zfish   192 ----------NEDEPEA-FNHAITVMTLMTIMSAVCEFVCDL----IYNITMSRIHTSIQGLVFQ 241

  Fly   160 SVIRQDIGWHDLASKQNFTQSMVDDVEKIRDGISEKVGHFVYLVVGFIITVAISFSYGWKLTLAV 224
            :|::|||.:.|.|:..:....:..|...:.:.:|||:.    |::.:.:.|...|.....|:..:
Zfish   242 AVLKQDIAFFDKATTGDIVSRITTDTNTMSESLSEKLS----LLMWYFMRVIFLFGSMLMLSTRL 302

  Fly   225 SSY----IPLVILLNYYVAKFQGKLTAREQESYAGAGNLAEEILSSIRTVVSFGGEKSEVQRYEN 285
            ..:    :|::.::.....:|..||:|:.|:|.|.|..:|.|..||::||.||..|..|.:||..
Zfish   303 CCFTLLGLPVIWIIPEIFGRFYQKLSAQVQDSLAKANEVATETFSSMKTVRSFANEDGETERYRK 367

  Fly   286 FL----------VPARKASQWKGAFSGLSDAVLKSMLYLSCAGAFWYGVNLIIDDRNVENKEYTP 340
            .|          ..|...|.|..:.|.|  |:..|:||        ||..|:... :|.:.:...
Zfish   368 CLEDTFALNKVEAAAYAVSTWTNSMSSL--ALKVSILY--------YGGRLVTGS-DVSSGDLVS 421

  Fly   341 AILMIAFFGIIVGADNIARTAPFLESFATARGCATNLFKVIDLTSKIDPLSTDGKLLNYGLRGDV 405
            .:|....|...|  :.:....|.::.   |.|.:..:|:.:|....:.|   ||.|....|:|.|
Zfish   422 FVLYELQFTSAV--EVLMSYWPHVKK---AVGASEKIFEYVDRKPDVPP---DGSLAPKTLKGHV 478

  Fly   406 EFQDVFFRYPSRPEVIVHRGLNIRIRAGQTVALVGSSGCGKSTCVQLLQRFYDPVFGSVLLDDLD 470
            :|::|.|.||.||:..|.:.:::.::||:..||||.||.||:|.|.||:|||.|..|.:|||...
Zfish   479 QFRNVTFAYPKRPDTDVLKNVSLELKAGKITALVGPSGSGKTTVVSLLERFYQPQNGEILLDQKP 543

  Fly   471 IRKYNIQWLRSNIAVVGQEPVLFLGTIAQNISYGKPGATQKEIEAAATQAGAHEFITNLPESYRS 535
            :..|..|:|...|:||.||||||..::.:||.|||..||.:||.|||..|.||:||::||:.|.:
Zfish   544 LLSYKDQYLHEKISVVSQEPVLFARSVRENIKYGKENATNEEIYAAARLANAHDFISSLPKGYDT 608

  Fly   536 MIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSH 600
            ..||:|.|:||||||||||||||||.|:||:||:|||:||.:||.:|..||....:..|.:::||
Zfish   609 DAGEKGGQVSGGQKQRIAIARALIQKPQILVLDDATSSLDTESEHRVYSALKKELQSCTVLLISH 673

  Fly   601 RLSAIRGADKIVFIHDGKVLEEGSHDDLMALEGAYYNMVR 640
            |||.:..||.|:|:.:|:::|||:|..|:..:|.|...|:
Zfish   674 RLSGVENADHILFLREGELVEEGNHQQLLDKQGFYAEFVK 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747 191/538 (36%)
MdlB 711..1299 CDD:440747
tap1XP_002665053.1 3a01208 42..712 CDD:273363 202/622 (32%)
Blue background indicates that the domain is not in the aligned region.

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