DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdr65 and abcb10

DIOPT Version :10

Sequence 1:NP_476831.1 Gene:Mdr65 / 38726 FlyBaseID:FBgn0004513 Length:1302 Species:Drosophila melanogaster
Sequence 2:XP_001343218.3 Gene:abcb10 / 100003744 ZFINID:ZDB-GENE-040525-2 Length:710 Species:Danio rerio


Alignment Length:672 Identity:228/672 - (33%)
Similarity:357/672 - (53%) Gaps:94/672 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   664 LALFEKSFETSPLNFEKGQKNSVQFEEPIIKALIKDTNAQSAEAPPEKPNFFRTFSRILQLA-KQ 727
            :||:..|.:::..:      .||..:|...|     |.|.|...|.|      ...::|||| .|
Zfish    84 VALYSTSTDSNQTS------KSVVNQESSAK-----TTADSLPVPSE------DVKKLLQLAHPQ 131

  Fly   728 EWCYLILGTISAVAVGFLYPAFAV------IFGEFYAALAEKDPEDALRRTAVLSWACLGLAFLT 786
            .|      .::| |||||..:..|      ..|:....:.....||.   ::.|:..||   .||
Zfish   132 RW------RLTA-AVGFLVISSTVTMSAPFFLGKVIDTIYTSPTEDF---SSSLTSLCL---MLT 183

  Fly   787 GLVCFL--------QTYLFNYAGIWLTTRMRAMTFNAMVNQEVGWFDDENNSVGALSARLSGEAV 843
            |:  ||        :.||...:|..:..::|...|::::.||:|:||  ....|.|..|||.:..
Zfish   184 GV--FLCGGAANAARVYLMQISGQQIVRKLRESLFSSILKQELGFFD--KTRTGELINRLSADTA 244

  Fly   844 DIQGAIGYPLSGMIQALSNFISSVSVAMYYNWKLALLCLANCPIIVGSVILEAKMMSNAVVREKQ 908
            .:...:...||..:::|:...:.|.:.:|.:..||...|...|.|....::..:.:.:...|.:.
Zfish   245 IVGRCLTDNLSDGLRSLAQAGAGVGMMLYVSPSLAAFVLMVVPPIACLAVIFGRFLRSISRRTQD 309

  Fly   909 VIEEACRIATESITNIRTVAGLRREADVIREYTEEIQRVEVLIRQKLRWRGVLNSTMQASAFFAY 973
            .:.||.::|.|.|:|:|||....:|...:::|::::..:..|.:::         .:.::.|:..
Zfish   310 ALAEATQLAEERISNLRTVRAFGKELTEVQKYSQKVDHIFELAKKE---------AVVSAGFYGV 365

  Fly   974 A--------VALCY-GGVLVSE-----GQLPFQDIIKVSETLLYGSMMLAQSLAFTPAFSAALI- 1023
            .        :::.| ||:|::.     |||        |..|:| :..:..|:|...:|.:.|: 
Zfish   366 TGLSGNVIILSVLYKGGLLMASEAMTVGQL--------SSFLMY-AFWVGISIAGFSSFYSELMK 421

  Fly  1024 ---AGHRLFQILDRKPKIQSPMGTIKNTLAKQLNLFEG-VRYRGIQFRYPTRPDAKILNGLDLEV 1084
               ||.||::::||||:.....|.:..:     .|.:| :.:|.:.|.||||.|:.|...|.|.|
Zfish   422 GLGAGTRLWELIDRKPEFPLNEGLVLTS-----ELLKGELEFRNVSFAYPTRKDSPIFQDLSLHV 481

  Fly  1085 LKGQTVALVGHSGCGKSTCVQLLQRYYDPDEGTIHIDHDDIQHDLTLDGVRTKLGIVSQEPTLFE 1149
            ..|..:|:||.||.|||:.|.||.|.||||.|.:.:|..||: ||....:|:.:|.|||||.||.
Zfish   482 PAGSVLAVVGSSGSGKSSLVSLLLRLYDPDSGIVSVDGHDIR-DLNPYWLRSHIGTVSQEPVLFS 545

  Fly  1150 RSIAENIAYG-DNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIAR 1213
            .||||||||| .:...|::.:|..||:.||||.||...|.||||.:|.:|..||||||||:||||
Zfish   546 CSIAENIAYGAPDPSQVTVEDIYRAAQIANAHDFIQEFPKGYDTVVGEKGVLLSGGQKQRVAIAR 610

  Fly  1214 ALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVE 1278
            ||::|||||||||||||||.::|.|||:||:....|||.::|||||||:|:||.:.|:...:|:|
Zfish   611 ALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLIIAHRLSTIQSADSVAVLDQHRVME 675

  Fly  1279 QGNHMQLISQG-GIYAKLHKTQ 1299
            .|:|.||::.. |::.||.:.|
Zfish   676 IGSHSQLLANDQGLFRKLMEKQ 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdr65NP_476831.1 MdlB 118..641 CDD:440747
MdlB 711..1299 CDD:440747 215/623 (35%)
abcb10XP_001343218.3 MdlB 122..698 CDD:440747 216/617 (35%)
Blue background indicates that the domain is not in the aligned region.

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