DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10274 and ranshi

DIOPT Version :10

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:561 Identity:119/561 - (21%)
Similarity:169/561 - (30%) Gaps:235/561 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VCRICLNRLPENGGGAGSFDLF------------LIPGLAKKLCVCTSLAVEQSDGFPKCLCAQC 67
            |||.|..|.    ....|.::|            |:.|...|.|          ...|..|||.|
  Fly     5 VCRTCGKRT----NAERSLNIFEKRNQTTLEHIKLLTGAVLKNC----------STLPNRLCASC 55

  Fly    68 FSRLDDMHEFQKLCVDSVQKFQDMVARNVFCPPASAQMKNFDLLNVAGNEPELVGQDEEDRINFD 132
            .:.|.....|::.|:: ||:                     :||:         .||:||.:.. 
  Fly    56 QTCLQQAISFRERCLE-VQR---------------------ELLH---------SQDDEDFLRI- 88

  Fly   133 PLLDHKMEMIENEEDVFKMLEHVDKEAEQVEKEVKQDELDAADLMTIFAAESSEESEEDIDQDVD 197
                       .:|....:||..:.|.:..|..::.:.||..:...|   :||....|||..:..
  Fly    89 -----------CQESPKSVLEQEELELDLAEISIEVERLDDLNEGPI---QSSGFKVEDILNESK 139

  Fly   198 FEPNSSDGDDDVPLAQRLRDNSRMIPKAKAAVIKEEDQEFPTGSEEEDEDGEKSKSRRKRIPPGE 262
            ...:..:.:||:       |.|.|     ..:|.|.|.|. ...:|...|.|..|.||.|..|  
  Fly   140 INEDEPNNEDDI-------DYSEM-----DYLIYESDTEV-DAKQELKSDSENPKKRRNRRNP-- 189

  Fly   263 RHLHRIIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDHAHTELSE 327
            |..:|...|..|....|..|.:..|.|.|..:                                 
  Fly   190 RDSNRTFFCEECGNHIKDRISFILHCKRHRGV--------------------------------- 221

  Fly   328 VHSCNVDGCGKTFPRIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKE 392
                                                :::.|..||..|..|..||:|:.||.| |
  Fly   222 ------------------------------------KEFGCEFCEDRFCTPAELKRHIRKHTG-E 249

  Fly   393 LPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICE 457
            .||.|..|.:.|                .:|         :||.:   |..|||.|:.|      
  Fly   250 KPFKCRHCSRSF----------------SDY---------STRLK---HERTHTNERPF------ 280

  Fly   458 HASHNKQSLANHIKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKS 522
                                   .|:.|...|..|:..|.|.:.|||||...|.:|.|.|    |
  Fly   281 -----------------------VCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLF----S 318

  Fly   523 LTKHLKTHEKRVLRAIETYR----QRQVEMGETPGEQFDNP 559
            ...||.||          ||    :|.::..:|   .||.|
  Fly   319 RYTHLTTH----------YRSNAHRRNMQKADT---IFDKP 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871 21/86 (24%)
C2H2 Zn finger 334..353 CDD:275368 0/18 (0%)
C2H2 Zn finger 368..388 CDD:275368 8/19 (42%)
COG5048 394..729 CDD:227381 41/170 (24%)
C2H2 Zn finger 397..417 CDD:275368 3/19 (16%)
C2H2 Zn finger 425..445 CDD:275368 3/19 (16%)
C2H2 Zn finger 453..474 CDD:275368 0/20 (0%)
C2H2 Zn finger 482..502 CDD:275368 6/19 (32%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
C2H2 Zn finger 695..715 CDD:275368
ranshiNP_649824.1 zf-AD 5..76 CDD:462262 21/106 (20%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 23/82 (28%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:463886 12/40 (30%)
C2H2 Zn finger 254..274 CDD:275368 7/47 (15%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:463886 11/27 (41%)
C2H2 Zn finger 310..328 CDD:275368 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

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